Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06180 ATGGTTTCAATCCTCAAGTTCCGAAGAATATTCTACACAATAGAAGCCACTGGCAGTCAAACATTTGTTGCCTTGAGACGGCACTGTCATTCTTGGGGTCACAGAAGGATTTCGGATATAAATCCGAATGAGAAGCTGTGTAGAGTAGGGCTGTTCTGGGACTTGGACAACAAACCACCCAATTCAATCCCACCTTATGAAGTTGCCAATAAGCTCAGAATAGCTGCAGCTTCTTTTGGAGTTGTTCGACATATGGTGGCTTATGCAAATAGCCACACTTTTAGCAATGTCCCCCACGTTGTTCGTGAGATGAGGAAAGAACGGGAACTGTTGTATCGTTTGGAGGATAAGGGTGTGATTAAGCGTAATGAGCCTCATGTTTGTCGTGTTTGTGGGAGGAAATTTTACACGAATGAAAAACTTGTTAATCATTTCAAGCAATTGCATGAGCGTGAGCATGCGAAAAGGGTGAATCAGATAGAGTCGGCTAGAGGGAGTAGGAAGGTGAAATTGGTGGGTCAGTATGCTATGAAAATGGAAAAGTATAAGAAGGCTGCAAGTGCTGTTTTGACTCCTAAAGTTGGGTATGGTTTGGCTGATGAGCTGAAACGGGCAGGGTTTTGGGTTCAAACTGTGTTGGATAGGCCGCAAGCTGCAGATATTGCGTTGCAAAAGCATATGGTGGATATGATGGATCATAGGCGGGTTGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTCGATGTTATAAAGGAAGCGAAGCTACGGTGTCTCAAGACTGTTGTTATTGGGGATTTTAGTAGTGATGGAGTCTTGAAAAGGACTGCCGATACTGCTTTTTCTTGGGAGGAAATTTTAATGGGGAAGGCGAAGAAGGAGGCTGTATCGGTTGTGGAAAACTGGAAAGATCGTGATATATTGAAAAGGTTGGAGTGGACATATAACCCAGAAGTGGATAAAAAGAAACTCAACTTGGATGATGCAGTTCCTGAAACATCTGGAGATGATGATATTGAAGATATCTGTGATGATATTGATGATGACTACAAGGATGACAAAGGTCCTTGGTGGAAATTAGACTCCGGTGATAAGAATGTCACAAATTGCTAA 1116 0.4238 MVSILKFRRIFYTIEATGSQTFVALRRHCHSWGHRRISDINPNEKLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHVVREMRKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRVNQIESARGSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQKHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSWEEILMGKAKKEAVSVVENWKDRDILKRLEWTYNPEVDKKKLNLDDAVPETSGDDDIEDICDDIDDDYKDDKGPWWKLDSGDKNVTNC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06180 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 154 IPR013087 -
Mepo3g06180 371 Gene3D - 43 288 - -
Mepo3g06180 371 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 41 367 - -
Mepo3g06180 371 Pfam NYN domain 198 281 IPR021139 GO:0004540
Mepo3g06180 371 CDD PIN_LabA-like 136 267 - -
Mepo3g06180 371 ProSitePatterns Zinc finger C2H2 type domain signature. 128 149 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06180 38 365 C2H2 Transcription Factor Family AT4G12240 57.988 1.69e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g06180 NYN 1.7e-08 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06180 - - tpra:123908087 590.112