Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06177 ATGCATGGTTACAACACAACTCATTCATCATCATCAATTGGTACCAATAATTTTGGAAGTCATGCTCCGGGAATCCTAAAAGCGATGGAGATTCTTGAAGCTCAGTTTGGGCATTTGCATACATCAACATCATCATCATCATCATCGTCAATTAATATCAATATTAATGATGACATCATCATAAATAACAACAAGAACAACAACATGATGATGACGATGAATACTTCTGTTGCTGCTTCTTCTCATCTTGATCTCCATGTAAGCTTATCATCACAATCACAAGAACTGCCTTCTCAAATGATTAATATTTATGTTGCTGATGTTGGGGATGTTAACAAGAACGATATGAGGAGGAAGAAGAAGAGCAATGAAAATATTGATGATGGAAGAATCCACAGCCTACCACACAAGAAATATGGACCATACCCATGTTCAAAATGCAATAAAATATTTGAAACATCACAAAAATTTGCTAATCATGTTTCATCAAGTCACTACAAGTTCGAAAGTGAAGAAGACAGAAAAAAGAGATACATTTCTAGGATTCAGAAGAGACCGCGTCTTCAGATTCAAAAGCTCAATGACGGAACAACTACTTTTGCTCCTGTTATTGCTTGTGTTGATAAGTCACATGCTTCAGTCAATAATGATGATCATAACATGATTGCTCTCACCCCTCTTCCAAGTGGGATAAAAATCAAGTCGGAGGCTTCAAATAATTAA 723 0.3582 MHGYNTTHSSSSIGTNNFGSHAPGILKAMEILEAQFGHLHTSTSSSSSSSINININDDIIINNNKNNNMMMTMNTSVAASSHLDLHVSLSSQSQELPSQMINIYVADVGDVNKNDMRRKKKSNENIDDGRIHSLPHKKYGPYPCSKCNKIFETSQKFANHVSSSHYKFESEEDRKKRYISRIQKRPRLQIQKLNDGTTTFAPVIACVDKSHASVNNDDHNMIALTPLPSGIKIKSEASNN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06177 240 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Mepo3g06177 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Mepo3g06177 240 SUPERFAMILY beta-beta-alpha zinc fingers 140 167 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06177 Mepo-Chr3 75974204 75975110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06177 128 202 C2H2 Transcription Factor Family AT5G22990 54.667 3.40e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g06177 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06177 - - mtr:112419833 339.732