Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06168 ATGGCTCCCCCAAAATCAAAACTCAAAACCCTAATTTCTCTCTCTAAACTCTTCTTTACTTTCTCTCTCCTCCTTCACACCGCCATTGCCGACGATGCCTCGTTCATGTCAAAGCTCGCCAAATCTCTCACTCCACCTCCGTCAGGGTGGTCGGGATCCTCGTTTTGCAGCTGGAACGGCGTGAAATGCGACGGTTCAGACCGTGTTACGTCGTTAAATTTAGGTTCGAAATCACTCACCGGAACTTTACCTTCCGATCTGAACTCACTCTCTCAACTCACTACACTTTCTCTTCAATCCAACTCGCTCACCGGCGCGTTGCCTTCACTCGCGAACCTCTCCATGCTTCATACGGTTTTCCTTGGAAGCAATAACTTTACTTCAATCCCTGATGGTTGTTTCGTTGGACTCACCAGTTTGCAGAAGCTCTCCCTGACGGGAAACATCAATCTCAAACCGTGGAAGCTTCCTACGGATTTCACTCAGTCTTCGAATCTCGTTGAGCTTGACCTTGGTCAAACGAATCTCATTGGTTCATTGCCGGATATTTTCGTTCCTTTGGTTAGTTTGCAGAATCTGAGGTTATCTTACAATAATCTCACTGGAGATCTACCTAACTCGTTTTCAGGATCTGGTATTGTGAATTTGTGGCTCAATAATCAGAATGACGGGTCTGGTTTTACCGGTTCGATTGATTTGCTTGCTTCGATGTCGCATTTGGCTCAAGTTTGGTTTCAGAAGAATAAGTTTACTGGTTCAATTCCTGATTTGTCAAACTGTACTAATTTATTTGATCTTCAGCTTCGTGATAATCAGTTAACAGGTGTTGTTCCATCTTCTTTGATGAGTTTATCGAGTTTGACAAATGTTTCATTGGATAATAATAAGTTGCAGGGTCCTTTTCCTTCTTTTGGGAAAGGTGTAAAGGTTACTCTTGATGAAGGGATCAATAGTTTTTGTAAAAGTACTCCCGGACCGTGTGATCCGAGAGTTAGTACTTTGCTTGATATTGCTGCTGGTTTTGGGTATCCACTTCCATTGGCGAATTCTTGGAAAGGAAATGATCCTTGTGATGATTGGACCTTTGTTGTGTGTTCCGCAGGGAAGATTATTACGGTTAATTTAGCGAAGCAGAATTTGAATGGAACTATTTCGTCTGCATTTGGGAATTTGACTGATTTGAGGAATTTGTATCTGAATGGTAATAATTTGACAGGTTCAATACCGGGGAGCTTGACGGGTTTGACTCAGCTTGAGGTTTTGGATGTGTCTAATAACAATCTATCTGGAGAGATTCCAAAATTTCTGGGTAAAGTGACGTTCAATTCGGCTGGTAATGTTTTGCTTGGAAAGTCTAAAGGTGATGGAGGAAGTGGAACTGCTCCACCAACGGATCCTAGTGGTGGGCCGAGTGGAAGTCCTTCGGGAAAGGGTGGTTCTTCGTTGTCGCCTGGTTGGATTGCAGGTATAGCTGTTATTGCTGTGTTTTTTGTTGCAGTGGTGTTGTTTGTGTTTTGTAAGTGTTATGCTAAAAACAGGAGGCATACGAAATTCGGAAGGGTTAATAATCCTGAAAATGGTAAAAATGATGTTAAAATTGATGTCATGAGTAATGTTTCTAATTCTAATGGATATGGTGGAGTTCCAAGTGAGTTACAGAGTCAGGGAAGTGAGCGTAGTGACAACCTTCAGGTTTTTGAGGGTGGAAATGTTACTATTTCAATCCAAGTTCTTAGACAAGTAACCGGTAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTATAAAGGGGAATTGCATGATGGAACTAAGATTGCTGTCAAGAGGATGGAATCTGTTGCAGTTGGAACTAAGGGATTGAATGAGTTCCAAGCAGAGATTGCAGTTCTGACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATACTGCATAAATGGCAATGAAAGGCTTTTGGTGTATGAGTATATGCCTCAAGGAACATTAACACAACATCTGTTTGATTGGGGTGAAAATGGATGTGCTCCTTTGACTTGGTTACAGAGGGTAGCAATAGCTTTGGATGTAGCACGAGGAGTAGAATACTTACACAGCTTAGCTCAGCAAAGTTTCATTCACAGGGACTTAAAACCCTCCAACATACTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCAGATGGCAAATATTCCGTCGAGACAAGGTTGGCTGGAACATTTGGATATTTGGCACCTGAGTATGCAGCCACTGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTTGGAGTAGTTCTGATGGAATTGATTACTGGTAGAAGGGCATTAGATGATACTATGCCTGACGAAAGATCTCATTTGGTTTCATGGTTCCGTAGGGTACTAGTTAACAAGGAGAATATACCTAAAGCAATTGATCAAACGCTCAACCCCGATGAAGAAACCATGGAGAGCATATATAAAATTGCTGAGCTAGCAGGCCACTGCACTGCTCGCGAACCATACCAGAGACCAGATATGGGACATGCAGTGAATGTCCTTGTTCCTCTGGTAGAGCAATGGAAGCCTAGCAACCATGAAGAAGAAGATGGTTATGGTATTGACCTTCACATGAGCCTTCCTCAAGCTCTACAAAGATGGCAAGCCAATGAAGGTACTTCCACAATGTTTAATGACATGTCTTTCTCACAAACCCAATCAAGTATTCCATCAAAACCTTCAGGTTTTGCAGACTCATTTGATTCAATGGATTGCCGGTAA 2802 0.4215 MAPPKSKLKTLISLSKLFFTFSLLLHTAIADDASFMSKLAKSLTPPPSGWSGSSFCSWNGVKCDGSDRVTSLNLGSKSLTGTLPSDLNSLSQLTTLSLQSNSLTGALPSLANLSMLHTVFLGSNNFTSIPDGCFVGLTSLQKLSLTGNINLKPWKLPTDFTQSSNLVELDLGQTNLIGSLPDIFVPLVSLQNLRLSYNNLTGDLPNSFSGSGIVNLWLNNQNDGSGFTGSIDLLASMSHLAQVWFQKNKFTGSIPDLSNCTNLFDLQLRDNQLTGVVPSSLMSLSSLTNVSLDNNKLQGPFPSFGKGVKVTLDEGINSFCKSTPGPCDPRVSTLLDIAAGFGYPLPLANSWKGNDPCDDWTFVVCSAGKIITVNLAKQNLNGTISSAFGNLTDLRNLYLNGNNLTGSIPGSLTGLTQLEVLDVSNNNLSGEIPKFLGKVTFNSAGNVLLGKSKGDGGSGTAPPTDPSGGPSGSPSGKGGSSLSPGWIAGIAVIAVFFVAVVLFVFCKCYAKNRRHTKFGRVNNPENGKNDVKIDVMSNVSNSNGYGGVPSELQSQGSERSDNLQVFEGGNVTISIQVLRQVTGNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGLNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWGENGCAPLTWLQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTMPDERSHLVSWFRRVLVNKENIPKAIDQTLNPDEETMESIYKIAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPSNHEEEDGYGIDLHMSLPQALQRWQANEGTSTMFNDMSFSQTQSSIPSKPSGFADSFDSMDCR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06168 933 FunFam Leucine-rich repeat receptor-like kinase 329 452 - -
Mepo3g06168 933 MobiDBLite consensus disorder prediction 452 479 - -
Mepo3g06168 933 SUPERFAMILY Protein kinase-like (PK-like) 565 861 IPR011009 -
Mepo3g06168 933 Gene3D Transferase(Phosphotransferase) domain 1 663 885 - -
Mepo3g06168 933 PANTHER OSJNBA0070M12.3 PROTEIN 16 933 - -
Mepo3g06168 933 SUPERFAMILY L domain-like 27 436 - -
Mepo3g06168 933 SMART LRR_typ_2 415 443 IPR003591 -
Mepo3g06168 933 SMART LRR_typ_2 187 210 IPR003591 -
Mepo3g06168 933 SMART LRR_typ_2 90 112 IPR003591 -
Mepo3g06168 933 SMART LRR_typ_2 113 136 IPR003591 -
Mepo3g06168 933 SMART LRR_typ_2 391 414 IPR003591 -
Mepo3g06168 933 CDD STKc_IRAK 591 864 - -
Mepo3g06168 933 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Mepo3g06168 933 Pfam Leucine rich repeat N-terminal domain 331 366 IPR013210 -
Mepo3g06168 933 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Mepo3g06168 933 Pfam Leucine rich repeat 373 428 IPR001611 GO:0005515
Mepo3g06168 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Mepo3g06168 933 FunFam Receptor-like kinase TMK4 30 325 - -
Mepo3g06168 933 Gene3D Phosphorylase Kinase; domain 1 549 662 - -
Mepo3g06168 933 FunFam receptor protein kinase TMK1 663 880 - -
Mepo3g06168 933 Gene3D Ribonuclease Inhibitor 31 327 IPR032675 -
Mepo3g06168 933 FunFam receptor protein kinase TMK1 547 662 - -
Mepo3g06168 933 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Mepo3g06168 933 Pfam Protein tyrosine and serine/threonine kinase 588 859 IPR001245 GO:0004672|GO:0006468
Mepo3g06168 933 MobiDBLite consensus disorder prediction 464 479 - -
Mepo3g06168 933 SMART serkin_6 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06168 933 Pfam Leucine Rich Repeat 189 209 IPR001611 GO:0005515
Mepo3g06168 933 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Mepo3g06168 933 ProSiteProfiles Protein kinase domain profile. 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06168 933 MobiDBLite consensus disorder prediction 910 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06168 Mepo-Chr3 75912074 75916132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06168 64 861 Receptor kinase-like Gene Family AT5G07280 32.439 4.32e-95 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mepo3g06168 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06168 - - gmx:100781851 1425.61