Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06150 ATGGCTTTCTGCAACAAGATTGGAAACCTCTTGAGGCAAGGGGCTACCCAGAGCACTCAAGCTCCTGTTTCATCCATGCTTAACTACTTGCGCCACATGTCTTCAAGCAAGCTCTTCATTGGAGGCCTTTCTTACCAAGTTGATGACCAGTCTCTTAGGGATGCATTTACAACCTACGGAGAGGTGGTTGAGGCAAGAGTTATCACTGATAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCACCAGTGAAGAGTCTGCAACTTCAGCACTCTCTATGGATGGACAGGATTTAAGTGGGCGAAACATTCGTGTGTCCTATGCAAATGATAGACAGGCTGGTGGACCTCGTCCCGGAGGTGGCTACAGCGGCGGCGGCGGATATGCCGGTGGTGGTGGTGGTGGATATAGCGGTGGTGGTGGTGGTGGTGGTTGGTGA 447 0.5078 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYQVDDQSLRDAFTTYGEVVEARVITDRDTGRSRGFGFVNFTSEESATSALSMDGQDLSGRNIRVSYANDRQAGGPRPGGGYSGGGGYAGGGGGGYSGGGGGGGW 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06150 148 MobiDBLite consensus disorder prediction 111 148 - -
Mepo3g06150 148 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 33 142 - -
Mepo3g06150 148 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 113 IPR000504 GO:0003723
Mepo3g06150 148 CDD RRM2_NsCP33_like 37 111 - -
Mepo3g06150 148 Gene3D - 14 147 IPR012677 -
Mepo3g06150 148 SMART rrm1_1 37 109 IPR000504 GO:0003723
Mepo3g06150 148 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Mepo3g06150 148 SUPERFAMILY RNA-binding domain, RBD 25 145 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06150 Mepo-Chr3 75712981 75714998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06150 9 114 C2H2 Transcription Factor Family AT2G19380 27.358 2.25e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06150 - - gmx:100527220 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06150 3 75712981 75714998 Mepo3g06150 3 75712981 75714998 ECH