Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06126 ATGAGAGGAAGAAGCTACAGTCCATCACCACCACCGCGTTACAGCAGAAGAGGTGGCGGAGGAGGAGGAAGAAGTCCAAGTCCTCGCCGCCGTTACGCTCCCCGTCAAAGCGATCTACCTACCAGTCTCCTTGTTCGTAACCTTCGCCATGACTGTAGACCTGAAGATCTTCGTAGACCTTTCGGTCATTTTGGTCCTCTTAAGGATATTTATCTCCCCAAAGATTATTACACTGGGCAACCTCGTGGTTTTGGTTTTATTCAATTTGTGGATCCTGCGGATGCTGCTGATGCTAAATATCATATGGATGGTCAAGTTCTTCTTGGTAGGGAGCTAACTGTTGTTTTTGCTGAGGAAAATAGAAAGAAGCCAACTGAGATGAGGGTCAGAGAGAGAAGTAGCGGTCGGCATTCTGATCGAAGGAGGTCTCCCCCACGTTATTCTCGTTCACCCCGCTATTCTAGGTCTCCACCTCGTCACAGATCTCGCTCTCGCGGAAGTCGTGACTATTATTCCCCTCCTCCTAAACGGAGGGAATATTCAAGATCTGTATCACCTGAGGATAGAAGGCACAGTCGAGAAGGATCACAACACCGCATAGAGAGGTCATACTCACGCTCTCCACCCAAGAACGGGGATGCGAGAAGCCGTAGCCAGAGTCCAGTGAAAGGCTCAGTCGAGAGCAGAAGTCCAAGTCCGAGCCGTGATGTCAGGGAAGCATCCCGCAGTAGGTCTCCCAGTCAGTGA 747 0.5047 MRGRSYSPSPPPRYSRRGGGGGGRSPSPRRRYAPRQSDLPTSLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHRSRSRGSRDYYSPPPKRREYSRSVSPEDRRHSREGSQHRIERSYSRSPPKNGDARSRSQSPVKGSVESRSPSPSRDVREASRSRSPSQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06126 248 MobiDBLite consensus disorder prediction 119 146 - -
Mepo3g06126 248 Gene3D - 33 150 IPR012677 -
Mepo3g06126 248 MobiDBLite consensus disorder prediction 119 248 - -
Mepo3g06126 248 MobiDBLite consensus disorder prediction 163 208 - -
Mepo3g06126 248 MobiDBLite consensus disorder prediction 209 231 - -
Mepo3g06126 248 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Mepo3g06126 248 SMART rrm1_1 42 115 IPR000504 GO:0003723
Mepo3g06126 248 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 40 235 - -
Mepo3g06126 248 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Mepo3g06126 248 MobiDBLite consensus disorder prediction 1 41 - -
Mepo3g06126 248 FunFam Serine/arginine-rich SC35-like splicing factor SCL30A 33 150 - -
Mepo3g06126 248 SUPERFAMILY RNA-binding domain, RBD 3 117 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06126 Mepo-Chr3 75479837 75482641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06126 41 150 Eukaryotic Initiation Factors Gene Family AT4G34110 30.631 2.30e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06126 K12900 - gmx:100775883 306.219