Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06125 ATGATGAATCCTTCTAAATCAGAAACAACAAATTCAAATTCAAATTCAAATTCAAATCCAAACAAAAAACAGAAGAAGAACAGTACGGGTAATGGAAGTAGCAGTACAACAACAACAACAACAACTACACCTTGTTGCAGTAAAGTAGGGTTGAAGAGAGGACCATGGACTGCAGAAGAAGATGAAGTTTTATCAGAATATATAAAGAAAGAAGGTGAAGGTCGTTGGAGAACTCTCCCCAAACGAGCTGGTCTTCTCCGTTGCGGCAAAAGCTGTCGTCTCCGTTGGATGAATTATCTTCGCCCATCCGTCAAACGCGGTCAGATCGCTCCTGATGAAGAGGATCTTATCCTCCGCCTCCACCGTCTTCTCGGCAATAGGTGGTCATTGATAGCTGGGAGAATTCCAGGAAGAACTGATAATGAGATAAAAAATTATTGGAACACACATCTCAGCAAGAAACTTATTAACCAAGGGATTGATCCCAGAACTCATAAGCCTCTTAATAATGTTAATAACCCTTCTTCTTCTTCTTCAATAATCCCAAATATTCATCACCAAAACAATACTCCTTTTTTTGCATCATCTTCTGCTCCTCTTTCCGATCATCATCAACATCAACATCCTCCAATTACTACTAATACTATCACTAACAATCCCTCTCATCATAATAATCATTATTCAACACAACAAGCTCAGGGTTGTGATAACTTAATTAATGATGTTTCTGCAATGGATAATCATCATGTGCTTACCAACAACAACAACAACAACAGAGGGGATTATGGTGACAGTAGTAATAACAATTACGGCGGTGATGATGTGTTTACTTCATTTCTGGATTCGTTGATCAACGATGATGCATTTGCTGCTCACAGATCAGAGAATGATCCTTTGATCTCATCTGCTGCACCACCAGCTTTGTGGGAATCGCCACTTATCATGACATCTACTCATAATTTCACCCAAAACCAAGATGGGAAAGCTTCATAG 993 0.3927 MMNPSKSETTNSNSNSNSNPNKKQKKNSTGNGSSSTTTTTTTTPCCSKVGLKRGPWTAEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKPLNNVNNPSSSSSIIPNIHHQNNTPFFASSSAPLSDHHQHQHPPITTNTITNNPSHHNNHYSTQQAQGCDNLINDVSAMDNHHVLTNNNNNNRGDYGDSSNNNYGGDDVFTSFLDSLINDDAFAAHRSENDPLISSAAPPALWESPLIMTSTHNFTQNQDGKAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06125 330 Gene3D - 53 105 - -
Mepo3g06125 330 FunFam transcription repressor MYB5-like 110 178 - -
Mepo3g06125 330 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 43 247 - -
Mepo3g06125 330 SMART sant 105 153 IPR001005 -
Mepo3g06125 330 SMART sant 52 102 IPR001005 -
Mepo3g06125 330 SUPERFAMILY Homeodomain-like 50 147 IPR009057 -
Mepo3g06125 330 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
Mepo3g06125 330 Gene3D - 109 178 - -
Mepo3g06125 330 FunFam Myb transcription factor 50 106 - -
Mepo3g06125 330 CDD SANT 55 100 IPR001005 -
Mepo3g06125 330 MobiDBLite consensus disorder prediction 1 46 - -
Mepo3g06125 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 100 IPR017930 -
Mepo3g06125 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 155 IPR017930 -
Mepo3g06125 330 CDD SANT 111 151 IPR001005 -
Mepo3g06125 330 ProSiteProfiles Myb-like domain profile. 48 100 IPR001005 -
Mepo3g06125 330 MobiDBLite consensus disorder prediction 197 229 - -
Mepo3g06125 330 Pfam Myb-like DNA-binding domain 53 100 IPR001005 -
Mepo3g06125 330 Pfam Myb-like DNA-binding domain 110 151 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06125 Mepo-Chr3 75471563 75472903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06125 38 290 MYB Transcription Factor Family AT3G13540 54.086 5.04e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g06125 Myb_DNA-binding 2.4e-13 CL0123