Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06112 ATGGTGAGTGTACCTGACTTTGAAGAAGCTGTTGAGCCACCAGCTTTACCTCCGTCACCTCCTGATGTGCTGTCTAGTATGGAAGCGGAACCAATAGCTCTCCCAACCTATTCTATTATCAGTAGGCCAAGTGCCGGAACCACAGGAAAATGCATACATTTGCTTGCAAATCTCTTTAAAGCTGCTGCCGATGCTACAGATGCAACCTTTTTCCAGTATAATGTTGCTATCACTTCAGAAGATAAAAGAACTGTTGAAAGCAAGGGCATCAGGAGAAAACTGATTAATAGGCTTCACCAAACATACTCTTCTGAACTTGGTGGCAAAAGCTTTGCATACGATGGAGAAAGAACTTTGTACACAGTGGGTCCTCTTCCAGATAATAAATTTGAGTTCACGGTATTTCTTGAGGAAACATTTGCAAGCAGTACTGAGAGTTTTGGTGCTAATGGAAGCCCTCACGAGGAAAATAAAAGGTCAAAACGTTCTTTTCAGTCAAAGACATTCACAATGGAGATAAGTTTTGCTGCCAAAATTCCCTTGCAGTCCATTGTTCTTTCCCTTAAAGGGATCGAGTCATATGCTAATTCTCAGGATGCATTGAGGGTTCTTGATACAGTACTGAGGCAGCGAGCAGCTAACAGAGGGTGTCTCTTGGTAAGGCAATCTTTTTTTCATAATGACTCGAGGAATTTCATTGATGTTGGAGGCGGAGTAGAAGGAGTTCGGGGTATTCATTCCAGTTTTCGTCTTACACAGGGAGGATTGTCTCTTAATATGGATGTGTCCACAACAACGATCGTAAAACCTGGACCTGTAATTGATTTTCTCCTATCTAACCAGAGTGTGAGGGAACCTCGTTATATTGACTGGACAAAGGCCAAGAGAATCCTTAAAAATTTAAGAGTTCGTGCTACACATCGTAACCAAGAATTCAAAATTTCGGGCTTGAGTGAGAAACCCTGCATTCAACAACTTTTTAGTATGAAGATGAAAAATGGAGAAGACAATAACGCGGAGCAGACAGTGGATATTACTGTATATGAGTATTTCGCTAAACACCGTGGCATTGAGCTGACCTCTTCTGCTTACTTTCCATGTCTTGATGTTGGGAAGCCAAATCGGCCCAACTTTTTGCCCCTGGAGCTATGTTCACTTGTTCCCCTCCAGCGGTATACAAAGGCATTATCTCCTGTGCAAAGAGCATCTTTAGTAGAAAAATCACGTCAAAAGCCTCAAGAGAAAATTGAAGTTCTGACAAATGCTATTGGAAATTCTGGCTATGATGATGATGTTGTTCTTGCGGCATGTGGCATTTCTATTGACAAGCAATTCACTCCAGTTGAAGGTCGAGTTCTTGAGACACCAAAGTTGAAGGTAGGTAAGAATGAGGACTGCTTCCCCAATAATGGAAGGTGGAATTTTAAAACGAAGACACTTCTACAACCATCACATATTGGTAAATGGGCTGTTGTCAACTTTTCTAAACAATGTGATACTAGTTACATAACAAGGGAGCTGATTAAATGTGGAATGAGCAAGGGAATGAATATTGAGCGGCCATTTACTTTATTAGAGGAAGAAGCACAAATGAGAAAATCTAACCCTGCTGCAAGGGTTGAAAAGATGTTTTCCTTGCTGTCATCTAAACTTAATGGTCCACCAGAGTTGATTCTTTGTGTCTTGCCAGATAGGAAAAACTGTGACATCTATGGGCCTTGGAAAAGGAAGTGTCTGTGTGATGCTGGGGTTGTCACACAGTGCATTTCCCCTCTCAAGATCACCGATCAATACCTTACTAACGTACTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGCTGGCAATAGAGCATTCTGGGCATCTTCCCTTGATTAAAGATACCCCAACGATGATTTTAGGGATGGATGTCTCTCATGGTTCCCCTGGCCGATCAGATATTCCATCAATAGCTGCTGTTGTTGGATCTCGATGCTGGCCTCTAATTTCAAGATATAGAGCATCTGTAAGATCACAGTCTCCTAAGGTGGAGATGATTGATTCTCTATTCAAGCCTGTGGATTATATGAGTGATGATGGTATTTTAGAAAAAAAGGATGATGGTATTATCAGGGAATTGCTTCTAGATTTCTATAGTTCAAGTCGTAACCGCAAACCAACTCAAATTATTCTCTTCAGGGATGGAGTTGGTGAATCTCAATTTCAACAGGTTTTAGATGTAGAGCTTAACCAGATAATAAAGGCCTATAAATATATTGATGTGGTTGAGAACGATGATGTTCCCAAGTTCACTGTAATTGTAGCACAGAAGAATCACCATACAAAGCTGTTTCAAGCTAATGCTCGGGAAAACGTTCCTCCTGGGACAGTTGTCGATACAAACATTGTGCATCCAAGAAATTACGATTTCTACATGTGTGCTCATGCTGGAATGATTGGAACGTCTAGGCCTGTGCATTATCACGTGTTGCTTGATGAAATTGGATTCTCGCCAGATGGCTTGCAAAACTTGATCAATTCGCTGTCTTACGTGAACCAGAGGAGCACAGCTGCAACCTCAATTGTGGCACCTATATACTATGCTCACCATACTGCAGCTCAAATGAGAAAAATTATGAATTTTGATGATTTATCAGAAGCATCTCCAAGTCCCGATTCAGAGGGAAACATCCCCATTCAAGAGCTTCCAAAGTTGGAATGGAATGTCAGGGACTCCATGTTCTTCTGTTGA 2739 0.4115 MVSVPDFEEAVEPPALPPSPPDVLSSMEAEPIALPTYSIISRPSAGTTGKCIHLLANLFKAAADATDATFFQYNVAITSEDKRTVESKGIRRKLINRLHQTYSSELGGKSFAYDGERTLYTVGPLPDNKFEFTVFLEETFASSTESFGANGSPHEENKRSKRSFQSKTFTMEISFAAKIPLQSIVLSLKGIESYANSQDALRVLDTVLRQRAANRGCLLVRQSFFHNDSRNFIDVGGGVEGVRGIHSSFRLTQGGLSLNMDVSTTTIVKPGPVIDFLLSNQSVREPRYIDWTKAKRILKNLRVRATHRNQEFKISGLSEKPCIQQLFSMKMKNGEDNNAEQTVDITVYEYFAKHRGIELTSSAYFPCLDVGKPNRPNFLPLELCSLVPLQRYTKALSPVQRASLVEKSRQKPQEKIEVLTNAIGNSGYDDDVVLAACGISIDKQFTPVEGRVLETPKLKVGKNEDCFPNNGRWNFKTKTLLQPSHIGKWAVVNFSKQCDTSYITRELIKCGMSKGMNIERPFTLLEEEAQMRKSNPAARVEKMFSLLSSKLNGPPELILCVLPDRKNCDIYGPWKRKCLCDAGVVTQCISPLKITDQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDTPTMILGMDVSHGSPGRSDIPSIAAVVGSRCWPLISRYRASVRSQSPKVEMIDSLFKPVDYMSDDGILEKKDDGIIRELLLDFYSSSRNRKPTQIILFRDGVGESQFQQVLDVELNQIIKAYKYIDVVENDDVPKFTVIVAQKNHHTKLFQANARENVPPGTVVDTNIVHPRNYDFYMCAHAGMIGTSRPVHYHVLLDEIGFSPDGLQNLINSLSYVNQRSTAATSIVAPIYYAHHTAAQMRKIMNFDDLSEASPSPDSEGNIPIQELPKLEWNVRDSMFFC 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06112 912 CDD PAZ_argonaute_like 270 387 - -
Mepo3g06112 912 Gene3D - 452 618 - -
Mepo3g06112 912 ProSiteProfiles PAZ domain profile. 298 388 IPR003100 GO:0005515
Mepo3g06112 912 SMART DUF1785_2 218 270 IPR014811 -
Mepo3g06112 912 Pfam PAZ domain 274 404 IPR003100 GO:0005515
Mepo3g06112 912 SUPERFAMILY PAZ domain 265 428 IPR036085 GO:0005515
Mepo3g06112 912 CDD Piwi_ago-like 433 872 IPR045246 -
Mepo3g06112 912 ProSiteProfiles Piwi domain profile. 557 876 IPR003165 GO:0003676
Mepo3g06112 912 MobiDBLite consensus disorder prediction 1 24 - -
Mepo3g06112 912 Gene3D - 624 912 IPR036397 GO:0003676
Mepo3g06112 912 FunFam Protein argonaute 7 265 392 - -
Mepo3g06112 912 Gene3D paz domain 264 392 - -
Mepo3g06112 912 Pfam Argonaute linker 1 domain 220 268 IPR014811 -
Mepo3g06112 912 FunFam Protein argonaute 3 625 912 - -
Mepo3g06112 912 Pfam Argonaute linker 2 domain 418 459 IPR032472 -
Mepo3g06112 912 SUPERFAMILY Ribonuclease H-like 541 874 IPR012337 -
Mepo3g06112 912 Pfam Piwi domain 557 875 IPR003165 GO:0003676
Mepo3g06112 912 Pfam N-terminal domain of argonaute 52 208 IPR032474 -
Mepo3g06112 912 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 38 878 - -
Mepo3g06112 912 SMART Piwi_a_2 557 876 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06112 Mepo-Chr3 75356100 75368808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06112 42 912 Eukaryotic Initiation Factors Gene Family AT1G48410 36.324 1.78e-157 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06112 K11593 - gmx:100778875 1315.83