Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06079 ATGGAAGCAAAAAAAGAGGAAGCACTTAAAGCAATAGAGAATGCTGAGAAAAGATTTGCTCATCGAGACTTTGTTGGAGCAAAAAGTTATGCTTTAAAAGCGAAAACACTGTGTCCTGGACTGGAGGGTATATCTCAATTGGTGACCACTTTTGAAGTTTACATTGCCTCTCAAGTTACATGTAATGGTGAACTAGATTGGTATTCTATTATGGGTTTAAAACCTTCGACAAATATAGAAGTTGTGAAGAAACAATACAAGAAGATGGCTGGGTTGCTCCACCCTGATAATAACAAGTGTGTCGGAGCTGATGGGGCGTTTCATCTTGTTTCTGAGGCATGGGCTAGGCTGTCTGGTAGTTATGATATGAAGAGAAATGCACAATTGAGTGCTGGGAATGGAGTTAATCACAAGGTTTTGTCTTCGGTTCATGCCTCTAGTGGTAATCAGGACACTTTCTGGACGATCTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATGTAAACAAGAAACTCTCTTGTAAGAATTGCCGCGGGATTTTCATTGCCGTCGAAACAGCCCCAGCAAATGGTTCGTTCCCATATAGTCCTTGGTCATATGGGTCTAGCAGTGGTTATGGAAGGCATTCATATGATGGAGTTACCTATGTTCCCACTAATGGCGCCTATTTCAATGGTAATGGGGTCACTGGATACCATTCGAATCACGGGTATGAGTATGTTTCAAATGTTCCATATCAATTTGGCTCTGCCGGATATGTCAATCAAAATGGATCAACTACCTTATCTGCTTGTCAAACCAACGGGAAAGCAAAGAGGGGAAGACCAAAAGTTAAATCAGGAGCTGATAGGAAGCATTGCTTGACAGAGACAATGGTCAATATAAGTTCAGATGTATCATTCTCCCGGAATGAACCACAGGAGGTTAAGCCAAGTAGACCTGAGAAGAAAAGGAAAGTTCTGGGAGCCAGTTTAAGAAATGTCCATGAAGGAAAGGGTTCAAAGTGTGCTTCAGAGTTGGCATTGGCTAATGGGAATGGCCAGAGGATTTCCAGTACTAGTGAAGTTCCAACAAAACAGTATTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATTGAGAAGGCCAGGACAGAAATAAGGAAGAAACTGGAAGAGATGAAGTTGGCATCTGAAACTGCAGCTGCTGTTATTGAGAGAAAAAAATCTCAAGCTGATGTCGGTCAGGTCAAAGGAGACACATGCACTAAAACAGCTCTGAATGTTTCTGATAATCAGTTAGAACATAGGAAAACGGTTCCAGTGACAATTACTGTCCCAGATCCTGACTTTCACGATTTTGATAAAGATAGGTCAGAGCCATGCTTCAAACCAAAACAAATATGGGCCTTGTATGATGAGGAGGATGGGATGCCCCGTTTGTATTGTCTGATCCGCGAAGTTGTCTCTGTCAATCCATTCAAGATTAACATTAGTTACTTGAGTTCGAAAACTGATAGTGAGTTTGGCCCAGTAAACTGGCTTGTTTCAGGTTTCACCAAATCTTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGTTCTAAGCAGGGTGAAGGCCGGTCGAGGCGGTTGTGTTCGCATATATCCCAAATGTGGGGACGTTTGGGCTGTTTACAGAAACTGGTCAACAGATTGGAACAGATCTACACCTGATGAAGTAAGGCATCAATATGATATGGTGGAGGTGCTAGATGATTATTCTGAGGAGCTTGGTCTTTGCGTTAGCCCCCTTATTAAGTTGGATGGGTTCAAAACTGTGTACAAGAGAAATGCAGACAAAAGTGCCATTAGATGGATACCAAGAAAGGAAATGTTACGCTTTTCGCACCAAGTGCCTTCGTGGTTGTTGAAGGGGGAGGAAGCAAGCAATTTGCCTGACAAATGTTGGGACCTTGATCCAGCTGCAACTCCTGATGAGCTCCTTCATGCTGCCATAGAAGCAAACGCTTCGTAG 2034 0.4248 MEAKKEEALKAIENAEKRFAHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTCNGELDWYSIMGLKPSTNIEVVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARLSGSYDMKRNAQLSAGNGVNHKVLSSVHASSGNQDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGIFIAVETAPANGSFPYSPWSYGSSSGYGRHSYDGVTYVPTNGAYFNGNGVTGYHSNHGYEYVSNVPYQFGSAGYVNQNGSTTLSACQTNGKAKRGRPKVKSGADRKHCLTETMVNISSDVSFSRNEPQEVKPSRPEKKRKVLGASLRNVHEGKGSKCASELALANGNGQRISSTSEVPTKQYSMAPAFDARKLLIEKARTEIRKKLEEMKLASETAAAVIERKKSQADVGQVKGDTCTKTALNVSDNQLEHRKTVPVTITVPDPDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKINISYLSSKTDSEFGPVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHVLSRVKAGRGGCVRIYPKCGDVWAVYRNWSTDWNRSTPDEVRHQYDMVEVLDDYSEELGLCVSPLIKLDGFKTVYKRNADKSAIRWIPRKEMLRFSHQVPSWLLKGEEASNLPDKCWDLDPAATPDELLHAAIEANAS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06079 677 SUPERFAMILY Chaperone J-domain 56 120 IPR036869 -
Mepo3g06079 677 Coils Coil 377 397 - -
Mepo3g06079 677 SMART dnaj_3 65 122 IPR001623 -
Mepo3g06079 677 Pfam DnaJ domain 66 119 IPR001623 -
Mepo3g06079 677 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Mepo3g06079 677 Pfam Domain of unknown function (DUF3444) 440 647 IPR024593 -
Mepo3g06079 677 PANTHER BNAC03G44070D PROTEIN 1 664 - -
Mepo3g06079 677 Gene3D DnaJ domain 54 123 IPR036869 -
Mepo3g06079 677 CDD DnaJ 66 118 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06079 Mepo-Chr3 75055823 75058236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06079 5 280 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.618 7.68e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06079 - - gmx:100792639 995.727