Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06064 ATGACAACCATGGTTGAAGCTTCAGGAATGATGATGATGTTCACCAACACCACTACTCTTATTCCTGCTTTTAACCCAACAATACACAAAACAACACATCTTGGTCTCTCACGTAGAAACCATGCTCATTTTACACTCTCTGCAACCTCATCATTGATGGAAACTATTCCTTGGGGATGTGAGAATGATTCAATTGTAAATTCATCTTCTCTTGAGAAATGGTTGTCTCAGTCAGGTCTTCCTTCTCAGAAGATGTCCATTGATAAAGTTGATGTTGGTGAGAGAGGACTTGTTGCTTTGAACAATATTAGGAAAGGAGAGAAGCTTCTCTTTGTTCCTCCTGAACTTGTCATCACTCCTGATTCTGAATGGAGCTGCCCGGAAGCTGGTGAAGTATTGAAAAAGAATTCAGTGCCTGATTGGCCATTGCTTGCAACTTACCTTATAAGTGAAGCTAGTCTCATGAAATCTTCAAGATGGTTCAGTTATATATCGGCTTTACCTCGTCAACCATATTCACTTCTTTACTGGTCACAAGCAGAGCTAGATCGCTACTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGACTAATAATGTTATTGGAACATACAATGATATGAGGGTTAGAATATTTTCCAAATACCCTGATTTCTTCCCTGAAGAGGTGTTCAACATCGAGTCCTTCAAATGGTCATTCGGCATTCTTTTCTCGCGCATGGTTCGGTTACCCTCTATGGATGGAAAGAATGCATTGGTTCCTTGGGCAGATATGATGAATCATAGTTGTGAGGTGGAGACTTTTTTGGATTACGATAAATCGTCAAAGGGAATTGTCTTTCCGACGGATCGTCCCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCAAACGGGGAGCTTCTGTTATCATATGGATTTGTTCCAAAGGAGGGCACAAATCCAAATGATTCAGTTGAGTTGTCATTGTCACTAAAAAAATCCGATGAGTCCTATAAGGAGAAGTTGGAATTGTTGAAGAAATATGGATTATCAGGATCTCAGTGTTTTCCTATAAGGGTTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCATGAGAGGAAAATTTGAAGAGATGGCTGCCGCCGCATCAAATAAAACTACCTCGAAGAAGGACTTGAGATATCCTGAAATAGAGGAGCAAGCATTGCAATTTATACTAGATAGTTGTGAATCAAGTATATCAAAATACAACAAGTTCTTACAGGTAAGTGGATCGCTAGATTTGGATGTGACTTCTCCGAAACAACTCAACCGAAGACTCTTTTTAAAGCAGCTAGCCGTGGACTTGTGTAATAGTGAGCGCAGGATATTGTTTCGTGCTCAATATATACTGCGAAGAAGACTGAGGGATATGAGGACTGGTGAATTAAAAGGCTTGAAAATCTTTAATGGGTTCTGGAATTTTTTCCAATGA 1497 0.3975 MTTMVEASGMMMMFTNTTTLIPAFNPTIHKTTHLGLSRRNHAHFTLSATSSLMETIPWGCENDSIVNSSSLEKWLSQSGLPSQKMSIDKVDVGERGLVALNNIRKGEKLLFVPPELVITPDSEWSCPEAGEVLKKNSVPDWPLLATYLISEASLMKSSRWFSYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERTNNVIGTYNDMRVRIFSKYPDFFPEEVFNIESFKWSFGILFSRMVRLPSMDGKNALVPWADMMNHSCEVETFLDYDKSSKGIVFPTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPNDSVELSLSLKKSDESYKEKLELLKKYGLSGSQCFPIRVTGWPLELMAYAYLAVSPSSMRGKFEEMAAAASNKTTSKKDLRYPEIEEQALQFILDSCESSISKYNKFLQVSGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRRLRDMRTGELKGLKIFNGFWNFFQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06064 498 CDD SET_RBCMT 77 313 IPR044431 GO:0016279|GO:0018022
Mepo3g06064 498 ProSiteProfiles SET domain profile. 83 299 IPR001214 GO:0005515
Mepo3g06064 498 Gene3D - 318 482 IPR036464 -
Mepo3g06064 498 FunFam Rubisco methyltransferase family protein 318 481 - -
Mepo3g06064 498 Pfam Rubisco LSMT substrate-binding 332 465 IPR015353 -
Mepo3g06064 498 SMART set_7 83 305 IPR001214 GO:0005515
Mepo3g06064 498 SUPERFAMILY SET domain 70 316 IPR046341 -
Mepo3g06064 498 Pfam SET domain 95 299 IPR001214 GO:0005515
Mepo3g06064 498 PIRSF RMT_SET 10 495 IPR011192 GO:0009507|GO:0030785
Mepo3g06064 498 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 53 435 - -
Mepo3g06064 498 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 329 487 IPR036464 -
Mepo3g06064 498 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 51 312 - -
Mepo3g06064 498 Gene3D set domain protein methyltransferase, domain 1 39 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06064 70 268 NAC Transcription Factor Family AT3G56570 22.059 6.56e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g06064 SET 1.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06064 - - cam:101500121 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06064 3 74935330 74939395 Mepo3g06064 3 74935330 74939395 ECH