Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06059 ATGGGCCTATCAAGTCTTCCAGCACAATCTGAAGGAGTGTTATGCATCATTTTAGTAAACACTGCCATGTCAATATCCATATTCAAAGGCATTATAAGGACTATCCTACACATTGTTGGTATCATTGCTTCACCATCTTCCTCTCCTTCACAAGACTATATCCCTCAGAATTCATCTGAGTCATATGAAATCCATCTAAGTCCTTCAGATGATTTCATTGAAGAGTTCAGAAGCAGGACACCAACACTCAGGTTTGACAGTGTGTCATGTAGTGGCTGTAAAGAACCTGAACATGATTGTTCAGTGTGTCTCACTCAATTTGAACCTGAATCAGAGATAAACTATTGCATATCATGTGGCCATGTTTTCCATAAAGTGTGTTTGGAGAAGTGGTTGGATTATTGGAACATTACATGTCCACTTTGTAGGAGTCCTTTAATTCCTGAAGATGATGCATCTTGCTTATGGTAA 471 0.3885 MGLSSLPAQSEGVLCIILVNTAMSISIFKGIIRTILHIVGIIASPSSSPSQDYIPQNSSESYEIHLSPSDDFIEEFRSRTPTLRFDSVSCSGCKEPEHDCSVCLTQFEPESEINYCISCGHVFHKVCLEKWLDYWNITCPLCRSPLIPEDDASCLW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06059 156 PANTHER - 1 151 IPR044249 -
Mepo3g06059 156 SMART ringv_2 99 143 IPR011016 GO:0008270
Mepo3g06059 156 Pfam Ring finger domain 99 143 IPR001841 -
Mepo3g06059 156 SMART ring_2 100 142 IPR001841 -
Mepo3g06059 156 ProSiteProfiles Zinc finger RING-type profile. 100 143 IPR001841 -
Mepo3g06059 156 SUPERFAMILY RING/U-box 99 148 - -
Mepo3g06059 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 148 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06059 Mepo-Chr3 74896871 74898531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06059 1 150 C3H Transcription Factor Family AT2G04240 56.410 1.27e-51 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06059 3 74896871 74898531 Mepo3g06059 3 74896871 74898531 ECH