Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06046 ATGGTTGTGCAGGTGGGATCTTTAGAAGGAAGAGGTGTGATAGAACTCGAAAACGCGAGCTTACTCAATCCTTCTTCATTTCCTAAAAAAGATGCATCATTTGGAGAAGAAGATTCACCAATTGATCATGAGTTTAGGAATTTCTCACAGGATGTAATAAAAATTAAGATGCTTAGTAGCATAAAACTTGTAATCCTTTCAACCAAGATAAACTTACTCCTGCCTTTTGGCCCCATGGCAATTTTGGTAGATAAATTGTTTCATAGTCATGGTTGGGTCTTTCTTTTTAGCTTATTAGGCATTATACCCTTGGCAGAGCGTTTGGGATATACAACTGAGCAGCTAGCATTCTTTACTGGACCTGCAGTTGGTGGTCTTTTATACGCCACATTTGGAAATGCAACAGAACTAATTATATCAATTCACGCCCTCAAAAGTGGATTGGTTCGTCTTGTTCAACAATCGCTCCTCGGTTCAATTTTATCTAACCTATTGTTAGTGCTTGGATCTGCATTATTTGCTGGTGGATTAGTATATCATAAGAAAGAACAACTATTTAACCATGCAGATGCAAACGTGGATTTCGGATTATTATTGATGGCGGTAATGGGACTGTTATTTCCAGCGGTTCTCCATGCTACACAAACAGAATTAGAATATGGGACATCTCAGTTATCTCTTTCAAGATTTACTAGTTGCATTATGCTTGTGGCATATGCTTCCTATATAGTGTTTCAATTGAAGATTCACAAGAATTTAGAACTTCCAGTTCCTGAGGACAAGAATTTCAATGAAGATACTTCAAATGATGCAGAAACTCCTGAGATTTCCATGTGGGAATCAATGATATGGATTTCAATCTTAACAGGAGGTATATCTATCCTGTCAGAATACTTGGTTAACACCATAGAGGGGGCATCAAAACAGTTTCAAATGCCGGTGTCATTTCTTAGTGTTATTCTTCTTCCAGTAGTAGGGAATGCTGCTGAGCATGTTGGATCTGTTATGTTTGCTGTCAAAGACAAACTTGACATATCGTTGGGCGTGGCTGTAGGATCTTCAATACAAATATCAATGTTTGTGATTCCATTTTGTGTGGTCGTTGGATGGATGATTGAATGTCCTATGGACTTGAATTTTAAGCCTTTCGAGACAACTTCACTTTTCATGTCAGTTATCATAGTTGCCTTCATGTTGCAAAATGGAACTTCAAACTACTTCAAAGGGATGGTACTCATTCTCTGCTATTTGATAGTTTCTGCAAGTTTTTTTGAACATATTGATCCTATGTTAGTTGGTGAGTAA 1305 0.3755 MVVQVGSLEGRGVIELENASLLNPSSFPKKDASFGEEDSPIDHEFRNFSQDVIKIKMLSSIKLVILSTKINLLLPFGPMAILVDKLFHSHGWVFLFSLLGIIPLAERLGYTTEQLAFFTGPAVGGLLYATFGNATELIISIHALKSGLVRLVQQSLLGSILSNLLLVLGSALFAGGLVYHKKEQLFNHADANVDFGLLLMAVMGLLFPAVLHATQTELEYGTSQLSLSRFTSCIMLVAYASYIVFQLKIHKNLELPVPEDKNFNEDTSNDAETPEISMWESMIWISILTGGISILSEYLVNTIEGASKQFQMPVSFLSVILLPVVGNAAEHVGSVMFAVKDKLDISLGVAVGSSIQISMFVIPFCVVVGWMIECPMDLNFKPFETTSLFMSVIIVAFMLQNGTSNYFKGMVLILCYLIVSASFFEHIDPMLVGE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06046 434 NCBIfam calcium/proton exchanger 57 424 - -
Mepo3g06046 434 Gene3D - 121 258 IPR044880 -
Mepo3g06046 434 Gene3D - 267 423 IPR044880 -
Mepo3g06046 434 FunFam Vacuolar cation/proton exchanger 269 425 - -
Mepo3g06046 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 53 429 IPR004713 GO:0006812|GO:0008324|GO:0016020
Mepo3g06046 434 Pfam Sodium/calcium exchanger protein 283 419 IPR004837 GO:0016020|GO:0055085
Mepo3g06046 434 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016020|GO:0055085
Mepo3g06046 434 NCBIfam calcium/proton exchanger 73 424 IPR004798 GO:0006816|GO:0015369
Mepo3g06046 434 FunFam Vacuolar cation/proton exchanger 121 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06046 Mepo-Chr3 74739037 74742315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06046 13 429 Antiporters AT1G55730 62.679 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06046 K07300 - jre:109000743 538.11