Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06013 ATGAATTACAGATGTTGTGTTTGTTTGGGAGAATTTGAGGTGAAGGAAGAGTTGCTACAGATTCCATATTGCAAGCATGTGTTCCACATCGATTGCATACATCACTGGCTACAATCAAATTCAACTTGTCCACTTTGTAGATGTTCCATCATTCCCACTATCACTAAATTCCTTAATCCTGCACCCCCTATTAATATTATTATATCAGACCCACCTCACCAAGATGCTATCAATTTGGATTCTCCATTACAAAATTCATCATTGCAAGATGAAGCTGGGGCTTCCTCAAATATCATGTCAAGAGAATGA 309 0.3786 MNYRCCVCLGEFEVKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTITKFLNPAPPINIIISDPPHQDAINLDSPLQNSSLQDEAGASSNIMSRE 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06013 102 MobiDBLite consensus disorder prediction 78 102 - -
Mepo3g06013 102 Pfam Ring finger domain 4 47 IPR001841 -
Mepo3g06013 102 ProSiteProfiles Zinc finger RING-type profile. 5 47 IPR001841 -
Mepo3g06013 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 54 IPR013083 -
Mepo3g06013 102 SMART ring_2 5 46 IPR001841 -
Mepo3g06013 102 PANTHER RING-H2 FINGER PROTEIN ATL16 3 84 IPR044600 GO:0016567|GO:0016740
Mepo3g06013 102 MobiDBLite consensus disorder prediction 75 102 - -
Mepo3g06013 102 SUPERFAMILY RING/U-box 4 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06013 Mepo-Chr3 74366055 74366879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06013 1 78 C3H Transcription Factor Family AT1G33480 39.759 6.95e-18 73.9