Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06009 ATGGATTCTGAAATTGATGATGTTGGTGTTGTAGAGAAAGATCCAACTTTGCGTTACGCACGGTATGATGAAATGTTAGGGAAAGGAGCTTTCAAGACTGTATATAAAGCTTTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAATCAAATTAGTATAGAGGATGTTATGCAATCACCGCAAAATTTGGAAAAGTTGTATTCTGAGGTTCACTTGCTCAAGTCACTGAAGCACGAAAATATCATTAAGATGTATAGCTCTTGGGTGGACGAAAAGAGCAGCAATATCAACATGATAACTGAATTGTTCACGTCTGGGAGTTTGAGGCAGTATCGTAAGAAGCATAAGAATGTGGATATGAAGGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGATTGTGCTTTCTGCACAGTCACAACCCACCTGTTATTCACAGGGATCTAAAATGTGATAATATTTTTGTTAACGGGAACACTGGACAAGTTAAGATTGGAGATCTAGGATTGGCAATTGTCATGCAGCAACCTACTGCCCGGAGTGTCATTGGTACACCAGAATTCATGGCCCCAGAGCTATATGAGGAAGAATACAATGAACTTGTTGACGTATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGCGAGTACCCGTATAGCGAATGCAAAAATCCGGCGCAGATATATAAAAAAGTTACCTCTGGTATAAAGCCCGCTTCTCTTGCTAAAGTGAGTGATCCTGAAGTCAAGCAATTTATAGAGAAGTGTTTAGTTCCAGCATCTATGAGGTTGCCTGCATCCGAACTGCTGAAAGACCCATTCCTTGCCACTGGAAATACGAAGGAGATCTATCATGATAACCTGCTACTGCCAAATCTCCCCAGCAAATCAATGAATCCACCAACTTGTGAGCCCCATCCCATGGAGATAGATTCAAACGTCAAGCAGACATCACCTGCCTCCTCTGTGGAAAGAGATAAAGAAACTTCTCAAGTTTCATCAAATCATGATATCCTGAGGAAGACGGAGAACAATGAATTTAGGTTAAAAGGGGAGAAGAATGCCGACAGGACAATTTCACTGACATTGCGAATTGCTGACGCTAATGGTGGAGCCAGGAATATCCATTTTCCATTCTATATCGATTCCGACACAACAATTTCAATTGCGGAGGAGATGGTGGAACATCTGGAACTCAAGGATGAGGATGTAGCTGTCATTGCTGAGCTTATACACAACATGATTTTTAAGCTTGTGCCTGACTGGAAACCCTTGTGCGAGAACTCATCTGGAACAGAGAATTTGTACAGGCCTTTGGAAGCTCAGAATGAACAGATAAACTGTCATTCGCCATTGGGGTCAAATAATTTTGATATGAAGTCAATGTATGAGGATTTAGGTCACTCACAGCTTGATGGGGAAGATCAGGACAAACAAGAATCTGTTTCATCAGATATTTCAGCTGAGTATGGGACTGCAATTGCCACTGATGCTAAAGGTGTAGAACAAGACTGTTTTATTCTTCATGAATGTTGCAAGGGATCGAACGGCTTAAATTCCAATTCAGATGTTAGAATTTGTGGTCAAGAAAATGGAAACAGTAATCAATCAGAGAACTCAGCAGTCTCATGTTGCAGTCCATCCGAAAACCTTGACATGTCAAGCAAATGTTCTCTTACTGCACTTGGCAAAGATCATTTAAACGAGCTACAGTTGGAGATTGAAGCAATTGAAATTCAGTATCAGCAAAGTTTTCGCGAGCTTATGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAAGAGATGGACTTCAAGGAAGAATATATCAGTTATGTAA 1845 0.4076 MDSEIDDVGVVEKDPTLRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISIEDVMQSPQNLEKLYSEVHLLKSLKHENIIKMYSSWVDEKSSNINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSHNPPVIHRDLKCDNIFVNGNTGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPASLAKVSDPEVKQFIEKCLVPASMRLPASELLKDPFLATGNTKEIYHDNLLLPNLPSKSMNPPTCEPHPMEIDSNVKQTSPASSVERDKETSQVSSNHDILRKTENNEFRLKGEKNADRTISLTLRIADANGGARNIHFPFYIDSDTTISIAEEMVEHLELKDEDVAVIAELIHNMIFKLVPDWKPLCENSSGTENLYRPLEAQNEQINCHSPLGSNNFDMKSMYEDLGHSQLDGEDQDKQESVSSDISAEYGTAIATDAKGVEQDCFILHECCKGSNGLNSNSDVRICGQENGNSNQSENSAVSCCSPSENLDMSSKCSLTALGKDHLNELQLEIEAIEIQYQQSFRELMKMREEAIENVKKRWTSRKNISVM 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06009 614 FunFam Probable serine/threonine-protein kinase WNK1 5 101 - -
Mepo3g06009 614 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 361 417 IPR024678 GO:0004674|GO:0005524
Mepo3g06009 614 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Mepo3g06009 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 608 - -
Mepo3g06009 614 Gene3D - 359 446 - -
Mepo3g06009 614 Coils Coil 569 596 - -
Mepo3g06009 614 FunFam probable serine/threonine-protein kinase WNK9 103 282 - -
Mepo3g06009 614 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06009 614 MobiDBLite consensus disorder prediction 313 330 - -
Mepo3g06009 614 CDD STKc_WNK 18 277 - -
Mepo3g06009 614 MobiDBLite consensus disorder prediction 301 338 - -
Mepo3g06009 614 Gene3D Transferase(Phosphotransferase) domain 1 103 284 - -
Mepo3g06009 614 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Mepo3g06009 614 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06009 614 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06009 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06009 Mepo-Chr3 74328556 74332054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06009 3 613 MAP Kinase Kinase Kinase AT5G41990 51.935 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo3g06009 Pkinase 3.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06009 K08867 - gmx:100783717 864.374