Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05990 ATGGAAGATTGTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACGCGCTTAGGCTTCACTGATCACCTATATGCAGCCTTGGTGCGCAAGAGTATAATAACTTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTCATCTCACAAAAACTACTCCTTGCAATTGAAGAATCTCTCTCAGCAGTTGTCATAATCTCCAAAAACTATGCTAACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGTTTGTTAGGACAACAAGTGTTCCCAATCTTCTATGGTGTAGATCCTTCCGATGTAAGGAATCAAAGGGGAAGTTTTGCCGAGGCTTTTAAGAAACATGAAGAGAAATTTAGTGAAAGCAAAGAGAAAGTGCAAAAGTGGAGAGATGCATTGAGAGAGGTTGCCAACTTGTCGGGGTGGGACTCCAAAGACCAACATGAAACTAAACTCATTGAAGAAGTTATTGCACAAGTATGGAAAAGACTGGAACTCAAGTTCCCATCCTATAACGATGGACTGGTTGCAATTGAAGTAAGATTGAAACAACTATATTCAACTCTGAAGCTAGGACTGGAGGATGTTCGTTTCATAGGGATATGGGGTATGGGTGGGATAGGAAAAACAACTCTTACTACAGCTCTCTTCAAAAAAATCAAAAGCCAATTTGATGTAAGTTGCTTCATTGCCAATGTCAGAGAGGTCTCTGGGGAAAGAAACCAAGATCTCCAACAGTTACAAAATAAAATTCTTTCTCATCTGAACATAAAAGGAATGGTAATTGAAACATTAAGCCAAGGAAAGGACAGCTTGAGAAACCTTTTATCCAACAAAAAGGTTCTTCTTGTCCTTGATGATGTAAGTTCTAAAAGCCAACTTGAGAATTTGGCAGGAAGCCAAGAATGGTTTGGTCGAGGTAGTAGAATTATAGTCACAACTAGGGATAAGCACCTCTTGATATCGCATGATGTATTGTTTGAAATGTATGAGAGTAAAATTTTAAATAAAAGCGAATCCCTTCATCTTTTTTGTGAAAAAGCATTTAAAGAGGATGCACCTAAAGAGGGTTTTGTGGAGTTGTCTGAAAGTGCGGTTGAATATGCTGGAGGCCTTCCTTTGGCTCTTGAAGTGTTGGGTTCTTTTCTATGTGGAAGAAGTTTATCTGATTGGGAGGATGCTTTAGTTAAGATTAAACAGGTTCCATACGATGATATCCTAAACAAACTTAGAATAAGCTATGACATGTTAGAAGATGAACACAAAACCATATTTCTAGATATTGCATGCTTTTTTAAGGGATGGTACAAACATAAAGTGATACAAATATTGGAAAATTGCGGCCTTCATCCAACAGTTGGAATAAATGTTCTCATAGAAAAATCGTTAGTAACTTTTGATGGAAGAGTTATCTGGATGCATGATATGCTTGAAGAAATGGGTAAAACTATATTTCAATGGAAGATTGTTCACAAAACTCAAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACACGCTTAGGCTTCACCAATCACCTATATGCAGCCTTGGTGCGTAAGAGTATAATAACTTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTCATCTCACAAAAACTCCTCCGTGCAATTGAAGAATCACTCTCAGCAATTGTCATAATCTCTAAAAACTATGCTAACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACAGTTGTTGGGACAACATGTGTTCCCAATCTTCTATGGTGTAGATCCATCCGATGTAAGGAATCAAAGGGGAAGTTTTGCCGAGGCTTTTAGGAAACACGAAGAGAAATTTACTGAAAGCAAAGAGAAGGTGCAAAGGTGGAGAGATGCACTGAGAGAGGTTGGCAACTTGTCAGGGTGGGACTCTAAGGATCAACATGAGACTGAACTCATTGAAGAAGTTATTGCACAAGTATGGAAAAAACTGGAACTCAAGTCCCCATCCTATAATGATGGACTGGTTGCAATTGATGTAAGATTGGAAGAAATACATTCAAATCTGAAGCTAGGATCGGAGGATGTTCGTTTCATAGGAATATGGGGTATGGGCGGGATTGGTAAAACAACTCTTACTACAGCTCTCTTCAAAAAAAATCAAAAGCCAGTTTGA 2205 0.3846 MEDCSQNSKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLLAIEESLSAVVIISKNYANSAWCLDELVKILESKRLLGQQVFPIFYGVDPSDVRNQRGSFAEAFKKHEEKFSESKEKVQKWRDALREVANLSGWDSKDQHETKLIEEVIAQVWKRLELKFPSYNDGLVAIEVRLKQLYSTLKLGLEDVRFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFIANVREVSGERNQDLQQLQNKILSHLNIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENLAGSQEWFGRGSRIIVTTRDKHLLISHDVLFEMYESKILNKSESLHLFCEKAFKEDAPKEGFVELSESAVEYAGGLPLALEVLGSFLCGRSLSDWEDALVKIKQVPYDDILNKLRISYDMLEDEHKTIFLDIACFFKGWYKHKVIQILENCGLHPTVGINVLIEKSLVTFDGRVIWMHDMLEEMGKTIFQWKIVHKTQKWKYHVFLSFRGEDTRLGFTNHLYAALVRKSIITFRDDEELARGEVISQKLLRAIEESLSAIVIISKNYANSAWCLDELVKILESKQLLGQHVFPIFYGVDPSDVRNQRGSFAEAFRKHEEKFTESKEKVQRWRDALREVGNLSGWDSKDQHETELIEEVIAQVWKKLELKSPSYNDGLVAIDVRLEEIHSNLKLGSEDVRFIGIWGMGGIGKTTLTTALFKKNQKPV 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05990 734 SUPERFAMILY Toll/Interleukin receptor TIR domain 505 652 IPR035897 -
Mepo3g05990 734 Pfam NB-ARC domain 206 413 IPR002182 GO:0043531
Mepo3g05990 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 731 IPR027417 -
Mepo3g05990 734 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Mepo3g05990 734 Gene3D - 175 337 IPR027417 -
Mepo3g05990 734 Gene3D - 671 733 IPR027417 -
Mepo3g05990 734 PRINTS Disease resistance protein signature 210 225 - -
Mepo3g05990 734 PRINTS Disease resistance protein signature 381 395 - -
Mepo3g05990 734 PRINTS Disease resistance protein signature 287 301 - -
Mepo3g05990 734 Pfam TIR domain 509 681 IPR000157 GO:0007165
Mepo3g05990 734 Pfam TIR domain 11 183 IPR000157 GO:0007165
Mepo3g05990 734 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Mepo3g05990 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 502 IPR044974 GO:0006952
Mepo3g05990 734 ProSiteProfiles TIR domain profile. 508 674 IPR000157 GO:0007165
Mepo3g05990 734 Gene3D - 5 174 IPR035897 -
Mepo3g05990 734 SMART till_3 509 649 IPR000157 GO:0007165
Mepo3g05990 734 SMART till_3 11 151 IPR000157 GO:0007165
Mepo3g05990 734 SUPERFAMILY "Winged helix" DNA-binding domain 417 499 IPR036390 -
Mepo3g05990 734 FunFam Disease resistance protein (TIR-NBS-LRR class) 348 430 - -
Mepo3g05990 734 Gene3D - 346 430 IPR042197 -
Mepo3g05990 734 FunFam Disease resistance protein (TIR-NBS-LRR class) 506 676 - -
Mepo3g05990 734 Gene3D - 506 670 IPR035897 -
Mepo3g05990 734 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 178 - -
Mepo3g05990 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05990 Mepo-Chr3 74168405 74178114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05990 207 498 WRKY Transcription Factor Family AT5G45050 39.590 3.70e-54 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05990 - - psat:127083448 859.366