Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05968 ATGGAACATCAACCCAGATTCAGCTCCATCCCTTTATTCTTCACCTTACTAGCTTCAATTCCATTCATAACAGAATCCAAATGCACAAAAGGCTGTTCACTTGCTTTAGCCAACTTTTACGTTTCCACAGGCTCCAACCTCACTTATATCTCAAGTATTATGAGATCGAACATTCAGACAAGACCGGAAGACATAGTTGATTATAGCCGGGAAATAATACCTAGTAAAGACAGCGTTCAAGCTGGTCAAAGACTCAACGTTCCATTCCCATGTGATTGTATCGACGGCGAGTTTCTCGGTCACAGGTTTAGCTACGATGTGGAAACTGGCGACACCTACGAAACTGTTGCTAGAAATAATTATGCTAACTTAACAAATGTTGAATGGTTGAGGAGGTTTAATACTTATCCACCGAATGGTATTCCTGATACTGGAACGTTGAATGTTACTGTTAATTGTTCTTGTGGGGATAGTGATGTTGGGAATTATGCTTTGTTTGTTACTTATCCGCTTAGGCCTGGTGAGACTTTGGGGTCTGTGGCGAATTCGAGTAAAGTTGATTTGTCTTTGCTGCAGAGGTATAATCCTGGTGTCAATTTTAATCAAGGGAGTGGCATTGTTTTTGTTCCAGGAAAAGGTCTTGGTGGTGGGGCTATTGGTGGAATAGCTGTTGGAATAGTGGTTGTTCTTCTGTTAGTGGCAGCTGCTATATATTTTGGATACTTCCGGAAGAAGAAGATACAAAAGGAGGAACTTTTTTCGCGAGATTCCACTGCACTCTTTTCTCAAGATGGGAAAGATGAAAATTCTCATGGTGCTGCAAACGTAACACAAAGGCCTGGTGTGATGACCGGCATAACAGTCGACAAATCAGTTGAATTCTCATATGATGAACTAGCAGCTGCCTCAGATAACTTTAGTATGGCTAATAAAATTGGTCAAGGAGGTTTTGGCTCTGTCTACTATGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAGGAATTTCTCGCTGAATTGAAAGTCTTGACACGTGTTCATCATCTTAACTTGGTGCGGTTGATTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTGAGTCAGCATTTGCGTGGTTCAGGTAGAGATCCACTGCCATGGGCTACACGTGTGCAAATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATCCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGCCAGCAAACATATTGATAGACAAAAATTTCCGGGGAAAGGTTGCTGATTTTGGATTGACCAAACTGACGGAAGTTGGTAGCTCGTCCCTTCCCACTGGTCGTCTTGTTGGTACATTTGGTTACATGCCCCCAGAGTATGCTCAATATGGAGACGTTTCTCCCAAAGTAGATGTTTATGCCTTCGGAGTTGTTCTTTATGAACTTATTTCGGCAAAGGAAGCAATCGTCAAGTCGAGCGAATCTGTTGCAGATTCAAAGGGACTTGTTGGTTTGTTTGAAGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTCGCAAAATAGTGGATCCAAGGCTTGGGGATAACTACCCTGCAGATTCAGTTCGCAAGATGGCTCAATTAGCCAAAGCGTGTACACAGGAAAATCCTCAACTGCGTCCGAGTATGAGATCCATTGTGGTTGCTCTTATGACACTTTCTTCAACTACAGACGATTGGGACGTTGGTTCCTTTTATGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1818 0.4202 MEHQPRFSSIPLFFTLLASIPFITESKCTKGCSLALANFYVSTGSNLTYISSIMRSNIQTRPEDIVDYSREIIPSKDSVQAGQRLNVPFPCDCIDGEFLGHRFSYDVETGDTYETVARNNYANLTNVEWLRRFNTYPPNGIPDTGTLNVTVNCSCGDSDVGNYALFVTYPLRPGETLGSVANSSKVDLSLLQRYNPGVNFNQGSGIVFVPGKGLGGGAIGGIAVGIVVVLLLVAAAIYFGYFRKKKIQKEELFSRDSTALFSQDGKDENSHGAANVTQRPGVMTGITVDKSVEFSYDELAAASDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKSSESVADSKGLVGLFEGVLSQPDPTEDLRKIVDPRLGDNYPADSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05968 605 Gene3D Transferase(Phosphotransferase) domain 1 377 596 - -
Mepo3g05968 605 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Mepo3g05968 605 Gene3D Phosphorylase Kinase; domain 1 281 376 - -
Mepo3g05968 605 SUPERFAMILY Protein kinase-like (PK-like) 286 577 IPR011009 -
Mepo3g05968 605 Pfam Protein tyrosine and serine/threonine kinase 308 576 IPR001245 GO:0004672|GO:0006468
Mepo3g05968 605 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 591 IPR044812 GO:0019199|GO:0045087
Mepo3g05968 605 FunFam PTI1-like tyrosine-protein kinase 3 377 591 - -
Mepo3g05968 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Mepo3g05968 605 FunFam LysM receptor kinase 2 285 376 - -
Mepo3g05968 605 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05968 605 CDD STKc_IRAK 312 574 - -
Mepo3g05968 605 SMART serkin_6 306 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05968 Mepo-Chr3 73915333 73922434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05968 16 605 Receptor kinase-like Gene Family AT3G21630 60.685 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo3g05968 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05968 K13429 - gmx:100777781 919.842