Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05962 ATGCTAAATTCTTTGATGCTGGATCTTGTAACTCAAGCAATTTTTTTGTTGAAGAAGCCTGTAACTCAAGCTATTAAAGCTTCAACGGGAAATTCTATCAAATTTGTTCTCAAGAGAGCAATTTTCTTTGAGGACAAATTCTTGTATGGCCTTGCTCAATGCATACCAAATCTCTCTAATGATAATTGCATGCAGTGTTTAAATGATGCTATTAGTTATCTGCAAACCTCATGTGCTAGAGGAAAGATTAGAGGAAGTGTTTTATATCCAAGTTGTGTTGTTAGATATGATCCTTATCCATTTTACAAACAACCAATAGTAAAAAGCGAGAAAAATGAAGAACAATCATTTAAAATATTTTTTTACGTTCTTGCTCCTGTCATGATTTGCTCGGTTGCGGGTATCTTTTTCGTGTATTATCTGAGACGTAGGAGAGCGAAGAAGAATCTCATGTACCACAGAGAAAATTTTGGGGAAGAGATTACATCAGAAGTGAACTCTCTGCAATTTGATTTTGATATGATTCGACTAGCAACAAACAAGTTCTCTGAAGATAACAAGATAGGGGAAGGTGGTTTTGGAGATGTTTACAAGGGAATGTTTCCTAATGGATATGAAATAGCAGTGAAGAGGCTCATAAGAAATTCAAGTCAAGGAGCTGTAGAATTTAAGAATGAGGTATTGTTAATAGCCAAGCTTCAACACAGAAATCTTGTGAGATTGTTAGGATTTTGCATTCAAAGGAATGAGAAGATACTCATTTATGAATATATGCACAACAAAAGCCTTGATTATTACCTATTCAGTCCTGAGAACCATAAAAAATTAACTTGGCACGCACGCTACAAGATTATAAGAGGGATTGCACGAGGTATTCTTTATCTACATGAGGATTCTCATCTAAATATCATACACTGTGATCTTAAACCCAGCAACATTTTGTTGGATGACCAAATGAATGCAAAGATATCAGATTTTGGCTTGGCAAGGACTGTTGCCATTGATCAAATGCAAGGAAATACTAGTATAATTGCTGGAACATATGGCTACATGTCTCCCGAATATGCAATGCTCGGCCAGTTTTCTGTTAAATCCGATGTATTCAGCTTTGGAGTCATAATGCTTGAGATTGTTAGTGGAAAAAGAAACGTTGATTATAATGGAGTAAACTCCATTGACGACCTCGTGAGCCATGCATGGAAGAAATGGACTGAAAATAAGCAATTGGAATTATTGGATCCTGCATTGACATACTCATTTTCAGAAACAGAAGTCAATCGGTGCATACAACTTGGTCTACTATGTGTGCAAGAAAATCCAGATCAGAGGCCAACTATGGCAACAATTGCTTTGTATTTCAACATTGATTCAATTGATTTGCCACTACCTCAACAGCCACCATTTTACATGCGTGGAAAAATAGAATCAAAGGTGGCTAGTAAAAAAACAATGTCAGGTCGACCAAGGAGTTATTCAGTGACAAGGTTTTAA 1491 0.3622 MLNSLMLDLVTQAIFLLKKPVTQAIKASTGNSIKFVLKRAIFFEDKFLYGLAQCIPNLSNDNCMQCLNDAISYLQTSCARGKIRGSVLYPSCVVRYDPYPFYKQPIVKSEKNEEQSFKIFFYVLAPVMICSVAGIFFVYYLRRRRAKKNLMYHRENFGEEITSEVNSLQFDFDMIRLATNKFSEDNKIGEGGFGDVYKGMFPNGYEIAVKRLIRNSSQGAVEFKNEVLLIAKLQHRNLVRLLGFCIQRNEKILIYEYMHNKSLDYYLFSPENHKKLTWHARYKIIRGIARGILYLHEDSHLNIIHCDLKPSNILLDDQMNAKISDFGLARTVAIDQMQGNTSIIAGTYGYMSPEYAMLGQFSVKSDVFSFGVIMLEIVSGKRNVDYNGVNSIDDLVSHAWKKWTENKQLELLDPALTYSFSETEVNRCIQLGLLCVQENPDQRPTMATIALYFNIDSIDLPLPQQPPFYMRGKIESKVASKKTMSGRPRSYSVTRF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05962 496 Gene3D Phosphorylase Kinase; domain 1 143 257 - -
Mepo3g05962 496 Pfam Protein tyrosine and serine/threonine kinase 185 450 IPR001245 GO:0004672|GO:0006468
Mepo3g05962 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Mepo3g05962 496 FunFam Cysteine-rich receptor-like protein kinase 10 142 257 - -
Mepo3g05962 496 FunFam cysteine-rich receptor-like protein kinase 10 258 460 - -
Mepo3g05962 496 SUPERFAMILY Protein kinase-like (PK-like) 167 470 IPR011009 -
Mepo3g05962 496 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 51 476 - -
Mepo3g05962 496 ProSiteProfiles Protein kinase domain profile. 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05962 496 CDD STKc_IRAK 188 450 - -
Mepo3g05962 496 Gene3D Transferase(Phosphotransferase) domain 1 258 457 - -
Mepo3g05962 496 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Mepo3g05962 496 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05962 496 Gene3D - 1 101 IPR038408 -
Mepo3g05962 496 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Mepo3g05962 496 Pfam Salt stress response/antifungal 27 97 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05962 Mepo-Chr3 73851795 73854672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05962 24 477 Receptor kinase-like Gene Family AT4G05200 47.468 1.85e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo3g05962 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05962 - - mtr:11443024 968.378