Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05959 ATGAACTCAATAAAGGAATTGCTACATGATTGGAATTCAAGAGTGAAGGTTGCACTTGGAGCAGCTAAAGGAATTGCTTTCATTCACACTGAAGGAGGTTCAAAATTTACACATGGAAACATCAAGTCAACCACCATACTAATAACAGAAGAATTTGATAGCTGCATTTCTGATGTTGGATTACCACCTCTGATGAATGGACCAGAAGTAACCGATTCCAAGAAGATCACACAGAAGTCCGATGTATACAGCTTTGGCGTGCTGCTACTCGAAATGCTAACAGGAAAGGTTCCAATGAGATATCCTGGTTATGAGGATGTTGTTGATCTTCCAAGATGGGTTAAATCTGTTGTGAGAGAGGAATGGACAGCTGAAGTATTTGATGAAGAACTTCTTAGAGGACAATATGTTGAAGAGGGAAAGGTGCAGATGCTTCAGATTGCACTTGCATGTGTGGCTAAGACACCAGATATGAGGCCTAGAATGGATGAAGCTGTTAGAATGATTGAGGAAATTAAACATCCTGAGTTTAAGAACAGGACATCCTCTGAGTCTGAATATTCTAATGTGCAGACACCATAA 582 0.4003 MNSIKELLHDWNSRVKVALGAAKGIAFIHTEGGSKFTHGNIKSTTILITEEFDSCISDVGLPPLMNGPEVTDSKKITQKSDVYSFGVLLLEMLTGKVPMRYPGYEDVVDLPRWVKSVVREEWTAEVFDEELLRGQYVEEGKVQMLQIALACVAKTPDMRPRMDEAVRMIEEIKHPEFKNRTSSESEYSNVQTP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05959 193 Pfam Protein tyrosine and serine/threonine kinase 67 167 IPR001245 GO:0004672|GO:0006468
Mepo3g05959 193 SUPERFAMILY Protein kinase-like (PK-like) 9 172 IPR011009 -
Mepo3g05959 193 Gene3D Transferase(Phosphotransferase) domain 1 2 192 - -
Mepo3g05959 193 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 173 IPR046959 -
Mepo3g05959 193 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05959 Mepo-Chr3 73824613 73825194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05959 10 173 Receptor kinase-like Gene Family AT5G58300 61.364 2.57e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g05959 PK_Tyr_Ser-Thr 4.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05959 - - aprc:113868460 313.538