Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05953 ATGGCCATGCAACTAAGTATTGGTTCTTCTTCTTCTTCTTCTTCTTCGTTTGCGAGGGTGGTGACTCCAAAAGAGTTTGACGTTTTTATTAGCTTTCGTGGTGAGGATACCCGTAGAAACTTCACAAGCCATCTTTATGAAGCTCTGAGCAAGAAAGTTATAACATTTATAGATGACAATGAGCTTGAAAAAGGAGACGAGATCTCGTCAGCACTGATCAAAGCTATTGAGGAGTCGTCTGCATCTATCGTCATCTTCTCAAAAGACTATGCTTCCTCAAAATGGTGCTTGAATGAACTCGTCAAGATTCTAGAATGCAAGAAAGATAATGGACAGATTGTGATACCTGTTTTCTATGAAATAGATCCATCACATGTGAGGAATCAGAAAGGAAGTTATATGTTAGCTTTTGAAAAACATGAACAAGATTTGAAGCAGAACAAAGACAAAGTGCAAAAATGGAAAAATGCTCTCACCGAAGCTGCCAATTTAGCTGGGTGGTACTCTCAAAATTACAAGAATGACTCCATCTTCATTAAATACATCATCGAAGATGTTTTGAAAAAATTGAATCTGAGACACCCATTTGAAGTTAATAAGCACCTTTTTGGAATTGAGGAAAAGTATGAAGAGGTTAAATTGTTACTGAAAATTGGGTCAAATGATGTTAGAGCCCTAGGATTATGGGGCATGGGCGGCATAGGAAAGACCACTCTAGCGAAACATTTATATTCCAAACTGTGTTCCCAATTTGATCATCATTGTTTACTCAAAAATGTAAGCGAAGAATCAACCAGATGCGGACTCAAAGGTGTACGTAATAAACTTTTTTCTAAATTGTTGGAGCTTCGTCCTCATGCACCTAATCTAGAAACCCCAATTCCCATGAGAAGACTTGCTTGTAAAAAAAGTTTAATTGTGTTGGATGATGTGGCAACCTTAGAGCAAGCAGAAAATCTTACCATAGTTAATAATTGCTTGGGACCAGGTAGTAGAGTCATTGTCACAACTAGAGATAAGCATATATGTAGTCAATTTAATGAATGTGCAATATATGAGGTCAAGGGATTGAACAAAGATGAATCTCTTGAGGTATTCTGTTTGGAGGCTTTTAGAGAAAAATATCCCAAAATTGGGTATGGAGATTTATCAAAAAGAGCAATTGGCTATTGCGGAGGTAATCCCCTGGGTTTAAAAGTTTTAGGTACAAATTTTCGTACCAAAAGCAAAGAAGTGTGGGAAAGTGAACTGGAAAAGCTCAAAAAGATACCCAATCGAAGAATTCATGATGTGTTAAAATTAAGTTTTGATGGTTTAGATTGTACTCAGCAGGATATATTTCTAGACATAGCATGCTTCTTCTTTTTGGGAAAATACATAAACCGAGATTTCATAATACCTATATGGGATGCTTGCAATTTCTTTGCTGAAAGTGGGATTGAAGTCCTTTCAAATAAGTCTCTCATAGTATTTAGAATTTGTAATCTTATAGATATGCATGATTTGTTAGTAGAAATGGGACGAGAAATTGTTAAGCAAGAATCTCCTAAAAACCCTGGAAGTAGAAGTCGATTGTGGGATCCCACGGAAGTTTGTGATGCATTGAAATATAAAAAGGGAACCGAAGTTGTTGAAGTTATCATATTCGACATTTCAGAAATTGGAGATCTATACTTGAGCTCTGATTCCTTTAAAAGCATGACCAACTTAAGATGTCTTCATATATTCAATAAAATGCAGCTCCCAGATGAGGGAAAACACTACAATGTGCACTTCCTCCAAGGTCTTGAATGGCTATCTGATAAATTGAGACACCTTTATTGGGATGGATTTCCACTCGAGTCCTTGCCATTGACCTTTTGTGCTGAAAGACTTGTACGACTTGAAATGTGCGGAAGCAAGCTAAAAAAGCTCTGGGATGGAATTCAGAAGCTTGACAATTTGAAGACGATTAACCTTGATTACTCTAAAGACCTTATTGAGATCCCAGACTTATCTAGGGCTCCAAAACTTCAATCAGTATCTCTTAATTTTTGTGAGAGCTTGTTTCAGCTCCATCCATCCATTCTCACTGCCCCCAAGCTTCAAGTTCTAGTTTTAAGAGGATGCAAAAATATTGAAAGCCTGAAAACCAACATTTCTTCAAAATCTCTTCGACGACTCGATCTCACTGATTGCTCATCTCTCGTGGAATTTTCAATGATGTCAGAGAAAATGGAGGAGTTTTCCTTAATACAAACCCCTAAACTTGAATGTTGGTCATTTATGTTTTGTAAGAGCAGCGATCAAATTCGTCCAAGTTGTCTCAGTCTAAGTAGATGTAAGAAGCTTAACATTGTTGGGAGCAAGTTATCAAATGATCTTATGGACCTGGAACTTGTAGGATGCCCACAAATCAATACATCAAATTTGTGGTTAATCCTTGATCAACTGCCATGTTTAAGAGAACTAAATTTGAGTGAGTGTTCCAACTTAGAAGCTCTCCCTGAAAACATCCAAAACAATTCAAAGTTGGAAGTCCTTAATTTAGATGAATGCAGGAAACTTAAGTCCCTACCAAAGCTTCCTTCATCCTTGACAGAGTTGAGAACCATGAACTGCACTGATCTGGACATTGATTCCATTCAACGACCATTGTTTGAGAACATATTACACAAACTCCACATCACCGACAACGAAGGGGATAGAATTTTCTATACTAATTTTGGTTTCACTTTCCTTCCAGGAGACCATGTTCCGGACAAGTTTGGTTTTCTTACAAGAGAGTCTTCAATAGTTATTCCTCTTGATCCCAAATGTAACTTGTCTGCTTTGATTTTTTTGCATCATTCTTTCTGGGAGATATGGTGA 2850 0.3723 MAMQLSIGSSSSSSSSFARVVTPKEFDVFISFRGEDTRRNFTSHLYEALSKKVITFIDDNELEKGDEISSALIKAIEESSASIVIFSKDYASSKWCLNELVKILECKKDNGQIVIPVFYEIDPSHVRNQKGSYMLAFEKHEQDLKQNKDKVQKWKNALTEAANLAGWYSQNYKNDSIFIKYIIEDVLKKLNLRHPFEVNKHLFGIEEKYEEVKLLLKIGSNDVRALGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLKNVSEESTRCGLKGVRNKLFSKLLELRPHAPNLETPIPMRRLACKKSLIVLDDVATLEQAENLTIVNNCLGPGSRVIVTTRDKHICSQFNECAIYEVKGLNKDESLEVFCLEAFREKYPKIGYGDLSKRAIGYCGGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDVLKLSFDGLDCTQQDIFLDIACFFFLGKYINRDFIIPIWDACNFFAESGIEVLSNKSLIVFRICNLIDMHDLLVEMGREIVKQESPKNPGSRSRLWDPTEVCDALKYKKGTEVVEVIIFDISEIGDLYLSSDSFKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWDGFPLESLPLTFCAERLVRLEMCGSKLKKLWDGIQKLDNLKTINLDYSKDLIEIPDLSRAPKLQSVSLNFCESLFQLHPSILTAPKLQVLVLRGCKNIESLKTNISSKSLRRLDLTDCSSLVEFSMMSEKMEEFSLIQTPKLECWSFMFCKSSDQIRPSCLSLSRCKKLNIVGSKLSNDLMDLELVGCPQINTSNLWLILDQLPCLRELNLSECSNLEALPENIQNNSKLEVLNLDECRKLKSLPKLPSSLTELRTMNCTDLDIDSIQRPLFENILHKLHITDNEGDRIFYTNFGFTFLPGDHVPDKFGFLTRESSIVIPLDPKCNLSALIFLHHSFWEIW 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05953 949 Pfam NB-ARC domain 212 422 IPR002182 GO:0043531
Mepo3g05953 949 ProSiteProfiles TIR domain profile. 24 190 IPR000157 GO:0007165
Mepo3g05953 949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 746 IPR044974 GO:0006952
Mepo3g05953 949 Gene3D - 23 190 IPR035897 -
Mepo3g05953 949 Gene3D Ribonuclease Inhibitor 730 907 IPR032675 -
Mepo3g05953 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Mepo3g05953 949 Gene3D Ribonuclease Inhibitor 544 729 IPR032675 -
Mepo3g05953 949 Pfam Leucine Rich Repeat 625 643 IPR011713 -
Mepo3g05953 949 Gene3D - 191 352 IPR027417 -
Mepo3g05953 949 PRINTS Disease resistance protein signature 713 729 - -
Mepo3g05953 949 PRINTS Disease resistance protein signature 298 312 - -
Mepo3g05953 949 PRINTS Disease resistance protein signature 225 240 - -
Mepo3g05953 949 PRINTS Disease resistance protein signature 391 405 - -
Mepo3g05953 949 Gene3D - 356 440 IPR042197 -
Mepo3g05953 949 Pfam TIR domain 26 193 IPR000157 GO:0007165
Mepo3g05953 949 SUPERFAMILY L domain-like 546 893 - -
Mepo3g05953 949 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 167 IPR035897 -
Mepo3g05953 949 Coils Coil 137 164 - -
Mepo3g05953 949 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 192 - -
Mepo3g05953 949 SMART till_3 25 164 IPR000157 GO:0007165
Mepo3g05953 949 SUPERFAMILY "Winged helix" DNA-binding domain 427 536 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05953 Mepo-Chr3 73793665 73797481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05953 8 862 WRKY Transcription Factor Family AT4G12020 31.379 3.52e-93 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05953 - - psat:127083478 1032.32