Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05945 ATGCATGGACCTGGCTGTTCTTCACTTGGGTATGGAGCCTTTCAGGAGCTGGGACCCTTCAGAATCAACTCTGATGGCAAAACACTATACCGTAACAATTATGCTTGGAATGAAGCAATTCCAACTCCTAAATTTAGAAACAAGAATGTGTTCTCCTACAGTGGTGATACAGATTCAGTGGGAGTCACAATTTCAAGATATCCAATCAACACGCTTAAGCTCCCTATCGACTCTGCTTGGCGTCCATGGTATTCTGGAAAAGAGATTGGAGGATATGTGGTGGGATACAAAGGATTGACATTTGCTACGGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCCGAACGTGCTTTGACTTTGATCTCATCGTTCCTCTCTGGAAATCTGCCTCCTTCTTCACCAATAAGACCTGGCTGTTCTTCACTTGGGTATGGAGCCTTTGAGGAGCTAGGACCCTTCAGAGTCAACTCTGATGGAAAAACACTATACCGTAACCAATATGCTTGGAATGAAGATGATGTGTTGTCCTACAGTGGTGATACAGATGCACGGGTTCCAGTCACAACTTCAAGATATGCAATCAACACCCTTAAGCTTCCTATCAACGCTTCCTGGCGTCCATGGTATTCTGGAAAAGAGATTGGAGGATATGTGGTGGGATACAAAGGATTGACATTTGTGACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGAAAGGGCATTGACAATGATCTCATCATTCCTCTATGGAAGTCTGCTTCCTGCTTCACCTTCAAAATAA 798 0.4461 MHGPGCSSLGYGAFQELGPFRINSDGKTLYRNNYAWNEAIPTPKFRNKNVFSYSGDTDSVGVTISRYPINTLKLPIDSAWRPWYSGKEIGGYVVGYKGLTFATVRGAGHLVPSWQPERALTLISSFLSGNLPPSSPIRPGCSSLGYGAFEELGPFRVNSDGKTLYRNQYAWNEDDVLSYSGDTDARVPVTTSRYAINTLKLPINASWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTMISSFLYGSLLPASPSK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05945 265 ProSitePatterns Serine carboxypeptidases, histidine active site. 99 116 IPR033124 GO:0004185
Mepo3g05945 265 SUPERFAMILY alpha/beta-Hydrolases 175 259 IPR029058 -
Mepo3g05945 265 FunFam Carboxypeptidase 44 129 - -
Mepo3g05945 265 ProSitePatterns Serine carboxypeptidases, histidine active site. 226 243 IPR033124 GO:0004185
Mepo3g05945 265 SUPERFAMILY alpha/beta-Hydrolases 3 39 IPR029058 -
Mepo3g05945 265 SUPERFAMILY alpha/beta-Hydrolases 139 173 IPR029058 -
Mepo3g05945 265 Pfam Serine carboxypeptidase 3 39 IPR001563 GO:0004185|GO:0006508
Mepo3g05945 265 Pfam Serine carboxypeptidase 49 129 IPR001563 GO:0004185|GO:0006508
Mepo3g05945 265 Pfam Serine carboxypeptidase 139 173 IPR001563 GO:0004185|GO:0006508
Mepo3g05945 265 Pfam Serine carboxypeptidase 176 254 IPR001563 GO:0004185|GO:0006508
Mepo3g05945 265 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 38 IPR001563 GO:0004185|GO:0006508
Mepo3g05945 265 FunFam Carboxypeptidase 165 256 - -
Mepo3g05945 265 Gene3D alpha/beta hydrolase 2 42 IPR029058 -
Mepo3g05945 265 Gene3D alpha/beta hydrolase 178 258 IPR029058 -
Mepo3g05945 265 Gene3D - 44 129 - -
Mepo3g05945 265 SUPERFAMILY alpha/beta-Hydrolases 47 133 IPR029058 -
Mepo3g05945 265 Gene3D alpha/beta hydrolase 137 177 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05945 Mepo-Chr3 73679223 73687604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05945 177 259 Calmodulin-binding Proteins AT2G22960 34.524 1.36e-10 57.4