Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05944 ATGTACAAGGCAACATATGCTCTAGGACCTGGCTGTTCCTCATTGGGGTATGGAGCCTTTCAGGAGCTAGGACCCTTCAGAATCAGCTCTGATGGCAAAACACTATACCGTAACCCATATGCTTGGACTGAAGATAATGTGTTCTCCTACAGTGGTGATACTGATGGAAGAGTTCCAGTTACATCTTCAAGATATTCAATCAACACCCTAAAGCTCCCGATCAACGATGCTTGGCGTCCATGGTATTCTGGAAAAGAGATTGGAGGGTATGTTGTGGGATACAAAGGATTGACATTTGTGACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGAACGGGCTTTGACTTTGATCTCATCATTCCTCTATGGAAGCCTGCCTGCTTCTGTTTCACCATCAAATTAA 414 0.4493 MYKATYALGPGCSSLGYGAFQELGPFRISSDGKTLYRNPYAWTEDNVFSYSGDTDGRVPVTSSRYSINTLKLPINDAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFLYGSLPASVSPSN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05944 137 Gene3D - 44 127 - -
Mepo3g05944 137 FunFam Carboxypeptidase 41 127 - -
Mepo3g05944 137 Gene3D alpha/beta hydrolase 7 43 IPR029058 -
Mepo3g05944 137 Pfam Serine carboxypeptidase 47 125 IPR001563 GO:0004185|GO:0006508
Mepo3g05944 137 Pfam Serine carboxypeptidase 9 44 IPR001563 GO:0004185|GO:0006508
Mepo3g05944 137 ProSitePatterns Serine carboxypeptidases, histidine active site. 97 114 IPR033124 GO:0004185
Mepo3g05944 137 SUPERFAMILY alpha/beta-Hydrolases 9 44 IPR029058 -
Mepo3g05944 137 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 47 IPR001563 GO:0004185|GO:0006508
Mepo3g05944 137 SUPERFAMILY alpha/beta-Hydrolases 46 130 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05944 Mepo-Chr3 73673760 73676945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05944 50 128 Calmodulin-binding Proteins AT2G22960 33.750 2.25e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05944 K16297 - mtr:11443022 166.392