Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05908 ATGGAACACAATCATAAACTAACAACAATAATTGAAGGAAAAGAAGGACAACCTATAAGATGCAAAGCTGCTGTTGCAAGGAAACCTGGTGAGCCATTGGTTATAGAAGACATCATTGTTGCCCCACCAATGCCTCGTGAGGTTCGGATTCGGATTTTATGTACATCTCTCTGCCACAGTGATATCACTCTTTGGAAGATGCAGGAACCTCCTGGCATTTTTCCAAGAATTTTGGGTCATGAGGCAACTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGAGATGTGGTTATTCCAATTTTTCTACCAGATTGTGGGGAGTGTATAGATTGCAAATCAACCAAGAGCAACCTTTGTACTAATTTCCCGTTCAAAGTTTCTCCTTGGATGCCTAGACATGAGAACACCAGATTCACAGACCTGAAAGGAGAGATCATATATCATTTCATGTATGTTTCAAGTTTCAGCGAGTACACTGTGGTTGACATCGCTAATGTAACAAAGATTGATCCTGAAATCCCTCCCAATAGAGCGTGCCTTCTCAGTTGTGGTATAGGAGCCGGGGTAGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGACTAGGATCTATTGGATTAGCAGTTGCTGAGGGAGCCAGACTTTGTGGAGCAACTAAGATTATAGGCGTAGACGTCAATCCAGAAAAATTTGAAGTTGGAAAGAAGTTTGGACTCACAGACTTTGTCCATGCTGGAGAATGTGGGAGCAAGCCTGTGAGCCAGGTCATCACAGAGATGACTGATGGGGGAGCAGATTATTGCTTTGAGTGTGTCGGTATGGCATCATTGGTGCAAGACGCGTATGCTTCTTGCAGAAAGGGTTGGGGAAAAACAATTGTCTTAGGACTGGACAAACCTGGATCCAGATTAAGCCTCAGCTGCAGTGAGGTACTTCATGATGGGAAGACACTTCAGGGAAATTTATTTGGAGGACTCAAACCTAAGTCTCATGTATCCATTCTACTCAAACGATACATGGACAAGGAACTGCAGCTGGATGAATTTGTCACTCATGAGGTAGAGTTTAAGGACATCAACAAAGCTTTTGATTTATTGAGAAATGGACAATGTCTTAGATGCATGATTTGGATGGATAAATGA 1179 0.4309 MEHNHKLTTIIEGKEGQPIRCKAAVARKPGEPLVIEDIIVAPPMPREVRIRILCTSLCHSDITLWKMQEPPGIFPRILGHEATGVVESVGKDVTEVTKGDVVIPIFLPDCGECIDCKSTKSNLCTNFPFKVSPWMPRHENTRFTDLKGEIIYHFMYVSSFSEYTVVDIANVTKIDPEIPPNRACLLSCGIGAGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPEKFEVGKKFGLTDFVHAGECGSKPVSQVITEMTDGGADYCFECVGMASLVQDAYASCRKGWGKTIVLGLDKPGSRLSLSCSEVLHDGKTLQGNLFGGLKPKSHVSILLKRYMDKELQLDEFVTHEVEFKDINKAFDLLRNGQCLRCMIWMDK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05908 392 PANTHER ALCOHOL DEHYDROGENASE 16 388 - -
Mepo3g05908 392 Pfam Alcohol dehydrogenase GroES-like domain 46 173 IPR013154 -
Mepo3g05908 392 Gene3D - 193 333 - -
Mepo3g05908 392 SUPERFAMILY GroES-like 15 196 IPR011032 -
Mepo3g05908 392 SUPERFAMILY GroES-like 342 389 IPR011032 -
Mepo3g05908 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Mepo3g05908 392 FunFam Alcohol dehydrogenase 6 24 203 - -
Mepo3g05908 392 Pfam Zinc-binding dehydrogenase 217 337 IPR013149 -
Mepo3g05908 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 353 IPR036291 -
Mepo3g05908 392 FunFam S-(hydroxymethyl)glutathione dehydrogenase 193 333 - -
Mepo3g05908 392 Gene3D - 24 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05908 Mepo-Chr3 73413953 73421505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05908 46 339 Monolignol Biosynthesis Gene Families AT4G37990 24.916 5.70e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05908 K00121 - gmx:100817521 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05908 3 73413953 73421505 Mepo7g02485 7 35983292 35986713 PCT