Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05896 ATGAAAGCCCATTGGCCCAATACGAAATTATATATAAACTTCCTCCATTCTCAAACCCTAAACCTTACTGGGTTTGCTGCGCCTAATCTCCATCATTCAAAGACAAACCGAGAAATGGGTGCCTACAAGTATATTTCTGAGCTATGGCGCAAGAAGCAATCTGATGTGATGCGATTCATGCAGCGTGTGAGGTGCTGGGAGTATCGTCAGCAATCCTCTATCGTTCGTCTCACCAGACCCACTCGTCCTGATAAGGCTCGCCGTTTGGGTTACAAGGCTAAGCAGGGATATGTTGTGTACCGAGTGAGGGTACGCAGAGGTGGTAGAAAGAGGCCAGTTTCCAAGGGTATTGTTTATGGTAAGCCCACCAACCAGGGAGTTACCCAACTCAAGTTTCAAAGAAGTAAGAGGTCAGTTGCTGAGGAGCGTGCTGGAAGGAAGCTCGGTGGTCTTAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCTACCTTCAAGTATTTTGAGGTTATATTGGTTGATGTTGCTCACAGCGCTATAAGAAATGACCCAAGAATCAACTGGCTCACCAACCCTGTCCACAAGCATAGGGAACTTCGTGGTCTCACATCTGCTGGTAAAGAAAACAGAGGTTTGAGTGGCAAGGGTCACCGTTACCACAAAGCCCGTCCTTCTCGCAGGGCTAACTGGAAGAGAAACAACACCTTGTCTCTTCGTCGTTACCGTTGA 729 0.4746 MKAHWPNTKLYINFLHSQTLNLTGFAAPNLHHSKTNREMGAYKYISELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVILVDVAHSAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTLSLRRYR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05896 242 ProSitePatterns Ribosomal protein L15e signature. 84 107 IPR020925 GO:0003735|GO:0005840|GO:0006412
Mepo3g05896 242 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 39 233 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mepo3g05896 242 MobiDBLite consensus disorder prediction 214 228 - -
Mepo3g05896 242 Gene3D Ribosomal protein l15e 39 242 IPR024794 GO:0003735|GO:0005840
Mepo3g05896 242 FunFam Ribosomal protein L15 39 242 - -
Mepo3g05896 242 SMART Ribosomal_L15e_2 40 231 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo3g05896 242 MobiDBLite consensus disorder prediction 202 242 - -
Mepo3g05896 242 PANTHER RIBOSOMAL PROTEIN L15 39 242 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo3g05896 242 Pfam Ribosomal L15 40 229 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05896 Mepo-Chr3 73276237 73278284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05896 39 242 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 87.745 1.01e-121 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05896 K02877 - gmx:100305473 375.17