Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05895 ATGGATTCGTTTGAGGCAGATGGAAACGGAAATGGTAACGGTAATGGGGTGGAGGAGTCATTGCCTCCTCCACCTCCTGTTGTCCCCTCTGATGTGGTACCTCTCAAAGCAGAGGAGCTGGCCCCTCCTGAACCTGTTAAGAAAAAAATTGCCCGTCTTCCAATGGCGAGACGCGGTCTAGGATCAAAAGGAATGAAGATACCGATTCTAACTAATCACTTCAGTGTTAACATTGGTAAAAATGATGGATACTTTTTCCAGTACAGCGTGTCGTTTGCTTATGAAGATGGACGCCCTGTGGAAGGGAAGGGTGTTGGGAGGAAGATTATGGACAGGGTGCAGGAGACATATGCTTCTGACTTGAATGGCAAGGAATTTGCATATGATGGGGAGAAGAGCTTGTTTACTATTGGCTCTCTTCCTCAAAACAAGCTTGAGTTTGAAATTGTTTTAGAGGATGTTGTTTCTAGCAGAAATAATGGAAATCGTAGTCCTGATGCTAATGGAGACAATGAAGCTGACAAAAAGAGAGTGCGACGCCCGTACAATGCAAAGACATTTAAAGTTGAGATTAGCTTTGCTACGAAAGTTCCTATGTATGCGATTGCAAATGCATTACGCGGGCAGGAAACAGAGAATTTCCAAGAAGCTGTTAGAGTTCTTGATATCATATTGAGGCAACATGCAGCTAAGCAGGGCTGCTTACTTGTGCGCCAGTCTTTCTTCCACAATGATCCCAAGAATTTTGCTGATGTGGGGGGTGGTGTTCTAGGCTGTCGAGGATTCCATTCAAGTTTTAGGGCTACACAGAGCGGGCTCTCTCTTAACATAGATGTCTCAACTACCATGATAATTCAACCTGGGCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGTTAGAGATCCTTTTCAGATTGACTGGGGAAAGGCCAAGAGGACCCTAAAAAATCTGAGGGTGAAGACTCATCCATCCAATCAAGAGTGGAAAATATGTGGACTCAGCGAAGTCCCATGCAAAGAGCTTACTTTTACTTTGAAGAAAAGGGATGGTGAGGGTACTGATGAAATGACTGTTTTGGATTATTTTGCTAATGTCCGGAAGATAGATCTGCGCTACTCTGCTGATCTTCCATGTATTAATGTTGGCAGGCCTAAACGGCCAACATATTTCCCCATTGAGCTGTGTGAGTTGGTATCACTGCAACGATATACTAAAGCTCTGTCCACACTTCAAAGGGCTTCACTGGTGGAGAAGTCCAGACAGAAGCCACAAGAGAGAATGAGAATTTTGTCGGATGCACTTAAAACTAGCAACTATGGGGCTGAACCTCTGCTTCAAAGTTGTGGAATTTCTATAAGCACAGGCTTCACTCAAGTGGAGGGACGTGTTTTGCCTGCTCCAAAGTTGAAGTTCGGCAATGGTGAAGATTTCACTCCGAGAAATGGACGATGGAATTTCAACAACAAGAAATTTGTGCAGCCAACAAAGAAGATAGAAAAATGGGCTGTGGCAAACTTTTCTGCACGATGTGATGTACGAGGACTTGTGAGGGATATAATTAGAATTGGAAATATGAAAGGAATTACGTTTGACCAACCATTTGATGTGTTTGAAGAAAATCCTCAGTTTAGACGAGCTCCACCACTGGTGAGAGTGGAGAAAATGTTTGAGGACATTCAGTCCAAACTTCCAGGGGCTCCTCAATTCCTTCTCTGTTTGCTTCCTGATCGGAAAAACTGTGATATTTATGGGCCATGGAAAAAGAAGAATCTTGCAGATTTTGGAATCGTTAATCAGTGCATGTGTCCTCTAAGAGTCAATGATAATTATTTGGGTAATATTATGTTGAAAATAAATGCCAAGCTTGGTGGGTTGAACTCTTTGTTGGGTGTTGAAAGTTCTCCATCTCTTCCTATTGTTTCCAAAGCACCTACCCTCATTCTAGGAATGGATGTGTCCCATGGCTCACCAGGGCAGACTGATATTCCTTCAATTGCCGCTGTTGTCAGCTCTAGACAGTGGCCTCTGATTTCAAAATATAGGGCATGTGTTCGCACACAGTCTGCAAAAGTTGAAATGATAGATAATTTGTTCAAGAAAGTATCAGATACCGAGGATGAAGGCATCATGAGGGAACTCTTGCTCGATTTCTATACTAGTTCTAAGAATAGAAAACCAGATAACATAATTATTTTCAGGGATGGTGTTAGTGAGTCACAATTCAATCAAGTCTTGAATATTGAACTCGACCAGATCATTGAGGCATGCAAGTTTCTTGATGAAAAATGGACTCCAAAATTTGTGGTAATTGTTGCTCAAAAGAACCACCACACAAGATTCTTCCAGCCCAATTCTCCTGACAATGTCCCACCTGGAACTGTTATTGACAATAAAATTTGTCATCCAAGAAACTATGATTTCTACCTCTGTGCTCATGCTGGGATGATAGGCACCAGTAGGCCTACCCACTACCATGTGCTGCTTGATGAGATTGGCTTCTCCCCTGATGAACTTCAGGAGCTTGTTCATTCCCTGTCATATGTTTACCAGAGGAGCACGACTGCTATTTCAGTTGTTGCACCTATATGCTATGCACACTTGGCCGCTACTCAGTTGGGGCAGTTCATGAAATTCGAGGATAAATCTGAGACATCCTCAAGCCATGGTGGGCTGAGTGCTGCAGGAGCTGTACCTGTCCCTCAGCTGCCAAAGTTGCAGGACAACGTGTGCAACTCCATGTTCTTTGTTTGA 2754 0.431 MDSFEADGNGNGNGNGVEESLPPPPPVVPSDVVPLKAEELAPPEPVKKKIARLPMARRGLGSKGMKIPILTNHFSVNIGKNDGYFFQYSVSFAYEDGRPVEGKGVGRKIMDRVQETYASDLNGKEFAYDGEKSLFTIGSLPQNKLEFEIVLEDVVSSRNNGNRSPDANGDNEADKKRVRRPYNAKTFKVEISFATKVPMYAIANALRGQETENFQEAVRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNVRDPFQIDWGKAKRTLKNLRVKTHPSNQEWKICGLSEVPCKELTFTLKKRDGEGTDEMTVLDYFANVRKIDLRYSADLPCINVGRPKRPTYFPIELCELVSLQRYTKALSTLQRASLVEKSRQKPQERMRILSDALKTSNYGAEPLLQSCGISISTGFTQVEGRVLPAPKLKFGNGEDFTPRNGRWNFNNKKFVQPTKKIEKWAVANFSARCDVRGLVRDIIRIGNMKGITFDQPFDVFEENPQFRRAPPLVRVEKMFEDIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADFGIVNQCMCPLRVNDNYLGNIMLKINAKLGGLNSLLGVESSPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSDTEDEGIMRELLLDFYTSSKNRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWTPKFVVIVAQKNHHTRFFQPNSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAGAVPVPQLPKLQDNVCNSMFFV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05895 917 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 49 880 - -
Mepo3g05895 917 Pfam Argonaute linker 2 domain 426 472 IPR032472 -
Mepo3g05895 917 Pfam N-terminal domain of argonaute 66 225 IPR032474 -
Mepo3g05895 917 SMART Piwi_a_2 570 878 IPR003165 GO:0003676
Mepo3g05895 917 SUPERFAMILY PAZ domain 282 440 IPR036085 GO:0005515
Mepo3g05895 917 ProSiteProfiles PAZ domain profile. 312 400 IPR003100 GO:0005515
Mepo3g05895 917 MobiDBLite consensus disorder prediction 158 179 - -
Mepo3g05895 917 FunFam Protein argonaute 7 282 404 - -
Mepo3g05895 917 CDD PAZ_argonaute_like 287 399 - -
Mepo3g05895 917 Gene3D paz domain 281 404 - -
Mepo3g05895 917 Pfam Piwi domain 571 878 IPR003165 GO:0003676
Mepo3g05895 917 Gene3D - 637 917 IPR036397 GO:0003676
Mepo3g05895 917 SUPERFAMILY Ribonuclease H-like 555 876 IPR012337 -
Mepo3g05895 917 CDD Piwi_ago-like 444 872 IPR045246 -
Mepo3g05895 917 Pfam Argonaute linker 1 domain 237 285 IPR014811 -
Mepo3g05895 917 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g05895 917 MobiDBLite consensus disorder prediction 1 16 - -
Mepo3g05895 917 FunFam Protein argonaute 3 638 917 - -
Mepo3g05895 917 Pfam Mid domain of argonaute 479 533 IPR032473 -
Mepo3g05895 917 Gene3D - 464 631 - -
Mepo3g05895 917 Pfam PAZ domain 291 416 IPR003100 GO:0005515
Mepo3g05895 917 ProSiteProfiles Piwi domain profile. 570 878 IPR003165 GO:0003676
Mepo3g05895 917 SMART DUF1785_2 235 287 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05895 Mepo-Chr3 73263747 73271474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05895 23 916 Eukaryotic Initiation Factors Gene Family AT1G48410 35.368 3.10e-167 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05895 3 73263747 73271474 Mepo3g05895 3 73263747 73271474 ECH
Mepo3g05895 3 73263747 73271474 Mepo7g02498 7 36146898 36151407 PCT