Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05890 ATGATGGCTACCGCTGGTGATGTTCTCAGGCAGAGTTTACCGGAAGTGAGTGGTGCTGGTGGTGTTGGAGAGTTGCACGTTCTTGCAGTGGATGATAGTTTTGTGGATCGTAAAGTCATTGAAAGGTTGCTTAAATTCACTTCTTGCAAAGTTACTGTTGTTGAGAGTGGAACTAGAGCTTTACAGTATCTTGGTTTAGATGGTGAAACAAGTTCCATTGGTTTTGATGGTGTGAAGGTTAATATGATAATGACTGATTATTCTATGCCTGGGATGACTGGATATGAATTACTCAAGAAGATTAAGCAGGAATCATCTCTTTTTAGAGAAATTCCAGTGGTGGTTATGTCCTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAAGAAGGGGCAGAGGAGTTTCTATTGAAACCTGTCAAGTTGGCAGATGTGAAACGCTTAACAGATTTCATAATGAGAGGTGAAGGGAAGAAAGTCGGAGGAAAAATATCTCAAAAAAGAAGTCGGTCAGATGATTGTATTTCATCTCTATCAACCGCTTGTTCAACATGTGAACTTTCGCCATTGTCACCGTCTGCAATGTCGTCAAAGAAATCCAGACTATAA 612 0.4036 MMATAGDVLRQSLPEVSGAGGVGELHVLAVDDSFVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGETSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKQESSLFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLADVKRLTDFIMRGEGKKVGGKISQKRSRSDDCISSLSTACSTCELSPLSPSAMSSKKSRL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05890 203 ProSiteProfiles Response regulatory domain profile. 26 154 IPR001789 GO:0000160
Mepo3g05890 203 SUPERFAMILY CheY-like 24 154 IPR011006 -
Mepo3g05890 203 Pfam Response regulator receiver domain 27 147 IPR001789 GO:0000160
Mepo3g05890 203 Gene3D - 25 177 - -
Mepo3g05890 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 170 IPR045279 GO:0009736
Mepo3g05890 203 CDD REC_typeA_ARR 27 149 - -
Mepo3g05890 203 SMART REC_2 25 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05890 Mepo-Chr3 73224654 73227365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05890 6 182 Response Regulator Gene Family AT3G48100 63.736 7.52e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g05890 Response_reg 2.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05890 K14492 - gmx:100306152 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05890 3 73224654 73227365 Mepo3g05890 3 73224654 73227365 ECH