Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05886 ATGGGAATTGCAGAAGAGAGGGTTGTGGCGGTTATCATGGTTGGAGGACCCACCAAAGGCACTCGATTCCGTCCATTATCATTCAACATTCCTAAACCACTCTTTCCATTAGCTGGACAACCCATGGTTCATCATCCAATCTCTGCTTGTCGAAAAATTCCTAATTTGGCTCGGATTTATCTTATTGGTTTCTATGAAGAACGCGAATTCGCATTATATGTTTCCTCCATCTCCAACGACCTTAAACTCCCTGTTAGATACTTGAAGGAGGACAAGCCTCATGGTTCTGCCGGTGGTCTTTATAACTTCAAAGATGTCATCATAGAGGAGGATCCGTCACATATTTTCTTGCTCAATTGTGATGTTTGCTGCAGTTTTCCACTCCCACAAATGCTCGATGCTCACAAAAAACATGGTGGTATGGGAACAATACTGGTTGTCAAGGTTTCTCCGGAGTCAGCCAGCGAATTTGGGGAATTGGTAGCTGATCCTGTCACCAATGAACTCTTACACTACACAGAGAAACCTGAAACTTTTGTTAGTGACCTTATAAACTGCGGTGTGTATATATTTACACCGGATATCTTTACTTCCATTGAGGGTGTTTCTTCTCAGCGGAAAGACAGAGCAAACTTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCAGGACACAAGGAGTCTACCGGCTAATTATGTCAGATTAGATCAAGATATCCTCTCACCTCTTGCCGGGAAGAAACAGTTGTATATATATGAAACCATGGATTTTTGGGAACAAATCAAAACTCCTGGGATGTCCATAAAATGTTCGGCCTTGTATCTTTCGCAATTTCGCCACACAGCCCCTCACCTATTAGCAAATGGAGATGGTATCAAGAAAGCCTGCATCATTGGTGATGTTTATATTCACCCATCAGCAAAAGTGCATCCGTCTGCAAAGATTGGTCCTGGCGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATAAATTGTATAGTCCTTGATGATGTTGAAATCAAGGAGAATGCTGTTGTTCTTCATGCAATTGTTGGATGGAAATCCTCCATTGGACGATGGGCACGTGTCCAGGGTCGTGGAGATTACAATGCAAAGTTTGGGGTCACTATACTTGGTGAATCTGTTGCTGTTGAGGATGAGGTAGTGGTTATTAGTAGCATTGTCCTTCCACACAAGACCTTAAATGTCGGCGTTCAAGATGAGATTCTATTATAG 1248 0.4287 MGIAEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACRKIPNLARIYLIGFYEEREFALYVSSISNDLKLPVRYLKEDKPHGSAGGLYNFKDVIIEEDPSHIFLLNCDVCCSFPLPQMLDAHKKHGGMGTILVVKVSPESASEFGELVADPVTNELLHYTEKPETFVSDLINCGVYIFTPDIFTSIEGVSSQRKDRANLRRVSSFEAMQQDTRSLPANYVRLDQDILSPLAGKKQLYIYETMDFWEQIKTPGMSIKCSALYLSQFRHTAPHLLANGDGIKKACIIGDVYIHPSAKVHPSAKIGPGVSISANARIGAGARLINCIVLDDVEIKENAVVLHAIVGWKSSIGRWARVQGRGDYNAKFGVTILGESVAVEDEVVVISSIVLPHKTLNVGVQDEILL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05886 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Mepo3g05886 415 Gene3D Hexapeptide repeat proteins 284 410 - -
Mepo3g05886 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Mepo3g05886 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Mepo3g05886 415 Pfam Nucleotidyl transferase 10 219 IPR005835 GO:0009058
Mepo3g05886 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Mepo3g05886 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 279 IPR029044 -
Mepo3g05886 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05886 Mepo-Chr3 73182561 73188271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05886 7 350 Eukaryotic Initiation Factors Gene Family AT2G34970 22.396 3.95e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05886 K00966 - gmx:100817201 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05886 3 73182561 73188271 Mepo3g05886 3 73182561 73188271 ECH