Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05871 ATGAGTCTAAAACAATTCTGGTTCTGGACAGTACTCACTTTTCTGTTTCTGTTTTTTCTAAAGACCAATTCAGAATCAGAAAATGTCAGAAAAGCCCTTGTCAAATTCATGCATCAACTTGAACCACCTGATCAGAATTCCATGTTGGGTTGGAACCTCACATCAGATCCATGCACTCATAACTGGCACGGTGTAACTTGTTACGCAAACAACCAATACATTAAGACTATAGTTCTTGAAGAACTTAATTTCACAGGCGTTCTAGACGCAACTTCTCTTTGCATTGCTAACACTCTTCAATACCTCAGCCTCAACAACAATTACTTACACGGTTTTATATCGGAGGATATAAAAGACTGTAAGTTCTTGACACACTTGCTTCTTAGTGGTAACAAATTTTCTGGCAATCTTCCTGTTTCCATTCCTCAGCTACGTAACATGAAACGCCTTCATGTTTCGGAGAATCTCTTCACTGGAAACCTTCCAGATATGGTTAATGTTACAAGCTTGATATCTTTTTTAGCTCAAAACAACAACTTCACTGGTCAGATTCCTGATTTTGATTTCTCTAACTTTGAAGTTTTTAATGTCTCTAACAACAATTTACGCGGTCCTATTCCTGATGTTGGAGGTACGTTTAGTGCAGATAGCTTTTATGGTAATCCAAATTTATGTGGAAAACCAATTTCAAACTCGTCATGTCCGCCTCCACCACCACCTCCTCCTCCAATCATTATAAAAGACAAAAAGAAAAATCCATTTCTTGATGATTTGCCAATTTATTCAGGCTACATAGTTATTGGTTTAATTTTCATAACCTTCTTGATCTTCAAGTTGTTAAGAAAATGCATGTCCAAAAATAATGAAACAGGATTAGATCATGTTGAAAAGAAGGACATGTCACAAGACACTAGTGGAGGTGTTGTTATTGTTGGTGGTGAAAAGCTTAGTGAGATATTAAATTCAAATGGATCAAAGAACTGGTTTAATGGCCTTGGTGTTAAATCAGAGTATTCTATGACATCTATGGAAAGTGGAGTGACTACATCAGGTCTTGTTCTTCTTTCAAGTAGAAAGCTTAGGGGGTTGCAATTTGAGGATTTGTTAAGTGCTCCTGCTGAATTGATTAGGAGAGGAAAGCATGGAAGCCTATACAAGGTTATGTTAGATAATGGTGTCCTTTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGAATTTGAAAGAAGGATGAATTTGATAGCTCAAGTGAAGCATACTCTTGTAATGTCACCTGTTGCATACTATTGCTCTCAGCAAGAGAAACTTCTGGCGTATGAATATCTTCCTAATGGTAGCCTCTTCATGCTTCTCTATGGATCTCAAAGTGGACACACTCTTGATTGGAAGAGCAGACTAGATGTTGCTGCTAAGATAGCTGAAGCTTTGGCCTATATGCATGAGGAGCTTGGTGAGAGTGGAATAGCACATGGTAACTTAAAATCAAGTAACATTCTGTTTGACAAGAATATGAATCCACAAATAAGCGAATATGGCTTAATGGTGGCTGAAAATCAAGGAGTCATTTCTCATATAAGAAGCCGCAGAAACAAAAATATGTCTTCATCATCCACCTTCAGAGCTGATATATATTCCTTTGGTGTGATACTTCTCGAACTCCTGACAGGAAAAGTTGTTAAAAATGACGGATTTGATTTGGTTAAATGGGTGAATTCAGTCATCAGTGAGGAATGGACTGCAGAAGTTTTTGATAGGTCTCTAATCTCACAAGGTGCTTCTGAAGAGAGAATGGTGAACTTGTTGCAGGTGGCATTAAAATGCATCAATCCTTCTCCAAATGATAAGCTTAGTATGAGTCAAGTGGTACTCATCACAAATGCGTTGAAAGATGAAGACGAAAAATCTGTATCCTTTGATAGATGA 1932 0.3763 MSLKQFWFWTVLTFLFLFFLKTNSESENVRKALVKFMHQLEPPDQNSMLGWNLTSDPCTHNWHGVTCYANNQYIKTIVLEELNFTGVLDATSLCIANTLQYLSLNNNYLHGFISEDIKDCKFLTHLLLSGNKFSGNLPVSIPQLRNMKRLHVSENLFTGNLPDMVNVTSLISFLAQNNNFTGQIPDFDFSNFEVFNVSNNNLRGPIPDVGGTFSADSFYGNPNLCGKPISNSSCPPPPPPPPPIIIKDKKKNPFLDDLPIYSGYIVIGLIFITFLIFKLLRKCMSKNNETGLDHVEKKDMSQDTSGGVVIVGGEKLSEILNSNGSKNWFNGLGVKSEYSMTSMESGVTTSGLVLLSSRKLRGLQFEDLLSAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHEFERRMNLIAQVKHTLVMSPVAYYCSQQEKLLAYEYLPNGSLFMLLYGSQSGHTLDWKSRLDVAAKIAEALAYMHEELGESGIAHGNLKSSNILFDKNMNPQISEYGLMVAENQGVISHIRSRRNKNMSSSSTFRADIYSFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRSLISQGASEERMVNLLQVALKCINPSPNDKLSMSQVVLITNALKDEDEKSVSFDR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05871 643 Pfam Protein kinase domain 376 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05871 643 Gene3D Transferase(Phosphotransferase) domain 1 445 642 - -
Mepo3g05871 643 SUPERFAMILY L domain-like 28 212 - -
Mepo3g05871 643 Gene3D Ribonuclease Inhibitor 189 236 IPR032675 -
Mepo3g05871 643 Gene3D Ribonuclease Inhibitor 26 188 IPR032675 -
Mepo3g05871 643 ProSiteProfiles Protein kinase domain profile. 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05871 643 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Mepo3g05871 643 Gene3D Phosphorylase Kinase; domain 1 342 444 - -
Mepo3g05871 643 PANTHER OS05G0588300 PROTEIN 11 633 - -
Mepo3g05871 643 FunFam Nuclear pore complex protein NUP107 26 186 - -
Mepo3g05871 643 SUPERFAMILY Protein kinase-like (PK-like) 374 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05871 Mepo-Chr3 73027868 73030392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05871 51 632 Receptor kinase-like Gene Family AT1G68400 34.360 3.16e-92 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g05871 Pkinase 1.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05871 - - pvu:PHAVU_009G180700g 793.497