Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05869 ATGGGATCATTCATTAATCTGGTAGACTTAGTTTCTGCAGATAACATCAATTTCCATCATAGGCGGAGCAATGATCATGATTCAAGTGCTTTCTCGCCAGAAGGAAGACATCAGAAGATGATAATCGTAGCAAACTATCTTCCTCTAAATTCTGAAAAGGATGACATTACTGGCAGATGGTGCTTTAGTTATGATGAAGATTCAATTTTTAGGCAGTTAAAGGATGGTCTATCTTCTGATATTGATGTTGTTTACGTGGGATCTCTGAAGGTTGATGTTGATAAAATCGAATTCTTGGCTTGGAATATGAATCCAAAAGGGGTCAAATTTGGATTGAATATTTTTGGCGTACGATATTCATTAAAATATTTGGGTCGCATTGAATCCACTTTAAATCAACTTTCCGATTCTATCAAAGTTAGAGAAGTCTCCAAACAATTTAAGGGGCAAAAACTTTTTATTGGTTTCGATGAATTGGACATGTTCAAAGGCGTGAGCTTGAAGTTATTAGCCTTTGAACAACTCTTTATACGGTGCCCAACACTACAGGGCAAGTTGTGTGAGAATCTTGGTATAGCAGCTGAGCAGGGTGGCTATATAAGATGGGGCGGAGAATCAGATTGGAAAACAAATTATGGCTGCAAAGATTTTGCTTGGAAAAGCGACGCTGATAAAGTGATGCGATCATATACTGATGAAATAGATGAATCATTTATAGAATACAAAGACAGTGCATTGGTATGGAATTATGCAACTTATTTTGGATCACAACAAGCCAATAAAATGTTGGACGATCTAAGAAGTAAGCTTGCCAATAAGCCTATTGTTGTTAAAAAGGGGAAGCATATTGTTGAGGTCAAGCTACAGGGGATTACTAAAGGATCAGTTGTAGACGAAGTTCTGTCGATGCTAACAATGAGCGGAAAATCGCCAGATTTTGTTCTGTGCATTGGGGATGATAAATCTGATGAGGACATGTTTGAGAGCGTATTAAACAAATCTTATGCTTCAACCTCATCTTCATCACCAGGAATTTTTGTATGTACTGTTGGGCAGAAACCAAGTAAAGCTAGTTACTACTTGGATGATAGTAAGGAAGTGATGATGTTACTTGCAGGTCTTGCTGCTGCTGGAGCAGAGTCTAGAACAAGATGTTCTACCGACACACCTTCTGGAAGTGCGTTGTGA 1188 0.383 MGSFINLVDLVSADNINFHHRRSNDHDSSAFSPEGRHQKMIIVANYLPLNSEKDDITGRWCFSYDEDSIFRQLKDGLSSDIDVVYVGSLKVDVDKIEFLAWNMNPKGVKFGLNIFGVRYSLKYLGRIESTLNQLSDSIKVREVSKQFKGQKLFIGFDELDMFKGVSLKLLAFEQLFIRCPTLQGKLCENLGIAAEQGGYIRWGGESDWKTNYGCKDFAWKSDADKVMRSYTDEIDESFIEYKDSALVWNYATYFGSQQANKMLDDLRSKLANKPIVVKKGKHIVEVKLQGITKGSVVDEVLSMLTMSGKSPDFVLCIGDDKSDEDMFESVLNKSYASTSSSSPGIFVCTVGQKPSKASYYLDDSKEVMMLLAGLAAAGAESRTRCSTDTPSGSAL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05869 395 Gene3D - 255 388 IPR023214 -
Mepo3g05869 395 Gene3D Glycogen Phosphorylase B; 125 194 - -
Mepo3g05869 395 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 39 185 - -
Mepo3g05869 395 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 124 186 IPR001830 GO:0003824|GO:0005992
Mepo3g05869 395 Pfam Glycosyltransferase family 20 125 186 IPR001830 GO:0003824|GO:0005992
Mepo3g05869 395 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 256 387 - -
Mepo3g05869 395 SUPERFAMILY HAD-like 186 374 IPR036412 -
Mepo3g05869 395 NCBIfam trehalose-phosphatase 189 374 IPR003337 GO:0003824|GO:0005992
Mepo3g05869 395 Pfam Trehalose-phosphatase 187 364 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05869 Mepo-Chr3 73016293 73018584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05869 38 93 Trehalose Biosynthesis Gene Families AT1G23870 57.143 2.28e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05869 K16055 - gmx:100812031 250.366