Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05867 ATGGCAGCACGCAGATTTTTCTCCTTGGTTTCTCGTTCTCAATCTTTCCCTAGGCCACCTCTTGGCTTTGCTTCTCTGCTTCATACATTAGGAAGAGACACCCAAAGGGGTAGAAACATAAGCAGGTTGAGCAGTGCTGCTGAAGTTGATGAATTAATCACACCATCTGTGGATATAAGATATACCAAGAATCTCATTAATGGGAAATTTGTGGATGCTGCATCAGGAAAAACTTTTCCAGCTTATGACCCAAGAACTGGGGAAGTGATTGCTCATGTTGCTGAAGGTGATCAAGAAGATATCAATCGTGCAGTATCTGCAGCTAGAAAGGCTTTTGATGAAGGACCATGGCCAAAGATGACCCCTTATGAAAGATCACGGATCCTATTGCGTGTTGCTGATTTGGTTGAGAAACACAGCGATGAACTTGCAGCACTAGAAACATGGAATAACGGCAAGCTTTATGAGCAAGCTGCAAACATCGAAGTGCCTATGTTTGTACGTTTGCTCCGCTACTATGCTGGTTGGGCCGATAAAATACATGGTCTCACAGTTCCAGCTGATGGGAATTATCATGTACAAGTATTGCATGAACCAATTGGAGTTGCAGGACAAATCATACCTTGGAACTTTCCTCTATTGTTGTTTGCTTGGAAAGTTGGTCCTGCATTAGCATGTGGTAATACTGTTGTAGTAAAGACTGCTGAACAAACACCTTTAACTGGTTTATTTGCAGCACAGCTATTTCAAGAGGCTGGTCTTCCACCAGGGGTTCTAAATGTTGTGTCTGGTTTTGGTCCAACTGCTGGTTCTGCTCTTGCCAGTCATATGGATGTTGACAAGATAGCATTCACTGGATCAACTGACACAGGAAAAATAATATATCAATTGGCTGCAAAAAGCAATCTCAAGCCAGTGACATTAGAGCTTGGAGGAAAATCACCATTTATAGTGTGTGAGGATGCTGATGTTGACAAGGCTGTTGAACTTGCACATTTTGCTTTGTTCTTTAATCAGGGTCAATGTTGTTGTGCTGGGTCGCGTACTTATGTCCATGAACGAGTATATGATGAGTTCTTGGAGAAAGCTAAGGCTGCTGCTTTGAGACGTATTGTTGGCGATCCATTCAAGAAAGGTGTCGAACAAGGTCCTCAGGTTGATTCACAACAGTTTGAGAAAATCCTCAAATACATCAAGTCAGGTATTGAAAGCAATGCTACTCTAGAATGTGGTGGTGACAGAATTGGCACAAAAGGCTTCTTTGTCCAACCAACAGTCTTCTCAAATGTTCAGGATGACATGTCAATAGCTAAGGATGAGATCTTCGGCCCTGTTCAAACCATATTGAAATTCAAGGACACTGATGAAGTCATAAGAAGGGCAAATAATACACGTTACGGTCTTGCTGCGGGAGTGTTCACAAATAATTTGGACACTGCAAATACGTTGATGAGAGGATTGAAGGCAGGAACGGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCAATTCCATTTGGTGGGTACAAGATGAGTGGGGTAGGAAGGGAGAAAGGTATATATAGTCTTCATAATTACTTGCAAGTTAAGGCTGTGGTTACACCTCTAAAGAATCCAGCATGGTTGTAA 1629 0.4211 MAARRFFSLVSRSQSFPRPPLGFASLLHTLGRDTQRGRNISRLSSAAEVDELITPSVDIRYTKNLINGKFVDAASGKTFPAYDPRTGEVIAHVAEGDQEDINRAVSAARKAFDEGPWPKMTPYERSRILLRVADLVEKHSDELAALETWNNGKLYEQAANIEVPMFVRLLRYYAGWADKIHGLTVPADGNYHVQVLHEPIGVAGQIIPWNFPLLLFAWKVGPALACGNTVVVKTAEQTPLTGLFAAQLFQEAGLPPGVLNVVSGFGPTAGSALASHMDVDKIAFTGSTDTGKIIYQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFLEKAKAAALRRIVGDPFKKGVEQGPQVDSQQFEKILKYIKSGIESNATLECGGDRIGTKGFFVQPTVFSNVQDDMSIAKDEIFGPVQTILKFKDTDEVIRRANNTRYGLAAGVFTNNLDTANTLMRGLKAGTVWINCFDVFDAAIPFGGYKMSGVGREKGIYSLHNYLQVKAVVTPLKNPAWL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05867 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Mepo3g05867 542 Pfam Aldehyde dehydrogenase family 70 532 IPR015590 GO:0016491
Mepo3g05867 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Mepo3g05867 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
Mepo3g05867 542 CDD ALDH_F2BC 59 534 - -
Mepo3g05867 542 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 66 330 - -
Mepo3g05867 542 SUPERFAMILY ALDH-like 57 536 IPR016161 GO:0016491
Mepo3g05867 542 FunFam Aldehyde dehydrogenase, putative 504 530 - -
Mepo3g05867 542 FunFam Mitochondrial aldehyde dehydrogenase 2 314 503 - -
Mepo3g05867 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 530 IPR016162 GO:0016491
Mepo3g05867 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 46 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05867 Mepo-Chr3 72994281 72998652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05867 1 542 Aldehyde Dehydrogenase Gene Family AT3G48000 76.796 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05867 K00128 - tcc:18603880 936.791