Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05826 ATGGGTATCATCATCAACAATAACAACAACAACAACATCAAAATAAATGGAGAAATTGAGAAGGTGGATGGGAAGGAATTGAGTTACAGTGAATTTGTTGAAAGATATATGGACAAGAACAAACCAGTGGTGTTAACTGGATTAATGGATCATCATTGGAGAGCTTACACTGATTGGGTTACTCCTAATGGAAAACCCAATCTTCAATTTCTCTTGAATCATTTTGGTTCCTCTAAAGTTCAGGTTGCAGATTGTGATACTAGAGATTTCACTGACCAAAAGAGAGAGGAGATGTTGGTCTCTGATTTCGTAGGACGTTGCCTTGAAGTTGAGGGTTCTGCAGTTCAGTGCAGTAATGAAAATGGTGAAAGTAATGGTGACTCTGTGTCTGTACCGTATTTGAAGGATTGGCATTTTGTCAAGGAGTATCCAGAATATGTAGCATACATAACTCCAACTTTCTTTTGTGATGATTGGCTTAACTTGTATCTTGACAACTTCAGAATGAATACTCATTCCGGCAGTGACCAGCAAAATAAGGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGAGTTAAAGGATCTTGGACTCCTCTACATGCTGATGTTTTCAGGTCGTACAGCTGGTCAGCAAATGTCTGTGGAAAGAAGAGATGGTTTTTTCTAGATCCTTCCCAATGCCATCTTGTGTTTGACAGGAATGCGAAAAGCTGTGTATATAATATTATTGATGAAGTATCCGACTCAAAATACCCTGGTTTTGAAAAGGCTATCTGGTTAGAATGCACACAAGAAGCAGGGGAAATCATATTTGTTCCCAGCGGATGGTATCATCAAGTTCATAATTTGGAGGATACAATATCTATAAACCACAATTGGTTCAATGCCTATAACCTTTCTTGGGTGTGGAATTTACTTTTGAACGACTACAATGAGGCCAAGGAATACATTGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTCTGCCAGCGCAACCTTGCTGCTAACACAGGGATGAATTTTTTTGACTTCTTTACTTTCACTTCATACTTCGCATTGGCCAACTTGGTGCTGCTTTGCTACATATATGGAAGAGATGGAAGTACCACTGGAAGTTTGTCAAGAGTAGCTCAGCATTTATCTTTAAATATTGGCTCTATTAGGAAGGTTGCATCAGATATGAAACACATGCATGCTCTAGAAGGGACTCATGATTGCATCGTGGATATGATAAAAACATTTGAAGATCCTAGGTTTTCCAAATTCTGCATGCAGGTGGGAATAACATATTTAATGATATATGAGCAATCCAATTTGTCCTCTGATTTTGAGAGTGCTTCATTGGTTGATTTGGTGGACCTCGGTGTTTTGAAAGCGTGCACTTCTTCTCAGATTTACACACCTGAAGACCTCATCAAATTTATAGACAATACCATCGCAGAACTGGGAGACCTTAACATGGAGTCATCTGTATCGCACGTTACTTGA 1500 0.3873 MGIIINNNNNNNIKINGEIEKVDGKELSYSEFVERYMDKNKPVVLTGLMDHHWRAYTDWVTPNGKPNLQFLLNHFGSSKVQVADCDTRDFTDQKREEMLVSDFVGRCLEVEGSAVQCSNENGESNGDSVSVPYLKDWHFVKEYPEYVAYITPTFFCDDWLNLYLDNFRMNTHSGSDQQNKEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNAKSCVYNIIDEVSDSKYPGFEKAIWLECTQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLNDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFFDFFTFTSYFALANLVLLCYIYGRDGSTTGSLSRVAQHLSLNIGSIRKVASDMKHMHALEGTHDCIVDMIKTFEDPRFSKFCMQVGITYLMIYEQSNLSSDFESASLVDLVDLGVLKACTSSQIYTPEDLIKFIDNTIAELGDLNMESSVSHVT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05826 499 Gene3D Cupin 3 296 - -
Mepo3g05826 499 SMART cupin_9 132 312 IPR003347 -
Mepo3g05826 499 SUPERFAMILY Clavaminate synthase-like 13 322 - -
Mepo3g05826 499 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 13 344 - -
Mepo3g05826 499 Pfam Cupin-like domain 31 295 IPR041667 -
Mepo3g05826 499 ProSiteProfiles JmjC domain profile. 157 312 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05826 Mepo-Chr3 72533372 72537733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05826 16 304 Glycosyltransferase AT1G78280 25.084 6.57e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo3g05826 Cupin_8 1.5e-24 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05826 - - gsj:114409851 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05826 3 72533372 72537733 Mepo3g05826 3 72533372 72537733 ECH