Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05824 ATGGCTAAGCGTTTGATTCCAACCTTCAACCGCATTCTTGTCGAAAAAATTGTCCCTCCTGCCAAGACCTCAGCTGGTATTCTCCTCCCAGAAAAGACTTCCCAGCTTAATTCTGGAAAGGTGGTAGCTGTTGGTCCTGGGTCGCGAGACAAATCTGGGAATTTGATTCCATTGTCTGTCAAGGAAGGTGACCACGTTCTCTTGCCGGAATATGGTTCCATTTGTTTAGGGACGAGGACATTTTGGGCATTCTACTTGATTGACGGGTACCATTTCTTTGGAAATGGGAAATTATGA 297 0.4545 MAKRLIPTFNRILVEKIVPPAKTSAGILLPEKTSQLNSGKVVAVGPGSRDKSGNLIPLSVKEGDHVLLPEYGSICLGTRTFWAFYLIDGYHFFGNGKL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05824 98 SUPERFAMILY GroES-like 4 74 IPR011032 -
Mepo3g05824 98 Gene3D GroES chaperonin 1 78 IPR037124 GO:0006457
Mepo3g05824 98 Pfam Chaperonin 10 Kd subunit 5 72 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 CDD cpn10 4 74 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mepo3g05824 98 SMART Cpn10_2 4 77 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05824 Mepo-Chr3 72508218 72509072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05824 3 72 Calmodulin-binding Proteins AT5G20720 40.845 7.09e-09 49.3