Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05818 ATGGCATCATCAAGCTCATACAATTCACCATGTGCAGCCTGCAAATTCCTTCGTCGAAAATGCATGCCAGGCTGCATCTTTGCACCATACTTTCCACCAGAAGAACCTCAAAAATTTGCCAACGTTCACAAGATCTTCGGTGCAAGCAACGTCACGAAGATCCTCAACGAACTCCTCCCTCACCAGAGAGAAGATGCAGTGAATTCCCTTGCTTATGAAGCCGAGGCACGTGTGAGAGATCCTGTTTATGGTTGTGTTGGTGCGATCTCTTTCCTTCAGAGACAAGTTCAGAGGCTTCAAAAGGAACTTGATTCTGCTAATGCTGATCTTCTTCGCTTTGCTTATAATGAAATCTCTCCTAATTCCTCTCTTCCACCTCTCCCTCCTCTCGTTGTTCCGGCTTCGTTTCATCAATCTCAAAGACAATTTAGTTCAAGATTTGGTAATGGGAATGTTGATGGAAATGGATTTTACTCTTCTTTTCCTTATGCTATTCCATGGATTAATGATACCTCTTCTGAGGATATAAGTGGAGGTGTAGGAGGAAGAGGAGGAGGTGTAGGAGGAGGTAATTTGTGA 579 0.437 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKILNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRFAYNEISPNSSLPPLPPLVVPASFHQSQRQFSSRFGNGNVDGNGFYSSFPYAIPWINDTSSEDISGGVGGRGGGVGGGNL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05818 192 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 129 - -
Mepo3g05818 192 Coils Coil 89 109 - -
Mepo3g05818 192 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Mepo3g05818 192 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05818 Mepo-Chr3 72437840 72439544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05818 1 130 AS2 family AT5G63090 75.000 7.27e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g05818 LOB 2.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05818 - - gmx:100803667 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01419 1 14028669 14029253 Mepo3g05818 3 72437840 72439544 ECH
Mepo3g05818 3 72437840 72439544 Mepo3g05818 3 72437840 72439544 ECH
Mepo1g01419 1 14028669 14029253 Mepo3g05818 3 72437840 72439544 PCT