Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05814 ATGGGTCGCCATTTCTGTTCTTTAAAGCAAAAACTAAGAAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTTTTCAATTACATAACCATGTTTGGTGTTGGATGTTGGAGTTCTGTTCCTAAACTAGCTGGGTTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGATCAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCAAAACAAGAGGAAGATCTTATTATCAATCTTCATGAAGCACTTGGAAATAGGTGGGCTCAAATTGCAGCACAATTACCAGGGAGAACAGATAATGAGATAAAAAACTTTTGGAATTCAAGTTTGAAGAAGAAACTATTGAAACAAGGGATTGATCCAGCTACACATAAACCCTTCATCAATAATGAATCTCTTATAAACGAACAGAAGGATAAACCATCAATGCTAATGCCACTGTCTCACTCTCAACCTCAAAGAATTTTAGCTACACAACACACAATGCTAGAATCCTCACATGAATACTCAGAAGCACTTCTAATGAGTGATTTGATTAATCACTATAATATTGGTGGATTATCTTTAACAGAAGGTTCAAGAAAATTTCTTATGAATAAGCCAACATTTGATTTTGATTCATTTCACTACAATTTAAGTATGAGCAATTATTATCAGCCAAGTCAATTACAATTTGAACAGAACCAATTTGGAACCAATTCAAGCTATTTCTTCTCTTCAATGCCTTGTTTAAATAGTTCAGAGTTTTCAGACAACATCAACAACTCAGTTTCCAAATTTAATTCTCCTTTGGTGAATGAAAGTTCAAGCAATAGTACTTCAACCATGAGTGATTATTATCAAATGAGCAACATGATTAATGAAAATGCAGGTGGATTAATCTCATGGGAAGGTGAAGAATTCATCAACAAGACAAGTTCATGGCAAGAAGGACAGTTGCTGAGTCATAATAATTCAATAGATTTCAGTACATATCCTTTAACGTCACTGTCAGAAGATCTAAGTAATATTGAAGCTAATTTTGATGTATTTCACCATTTATGA 1050 0.341 MGRHFCSLKQKLRKGLWSPEEDEKLFNYITMFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSKQEEDLIINLHEALGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLLKQGIDPATHKPFINNESLINEQKDKPSMLMPLSHSQPQRILATQHTMLESSHEYSEALLMSDLINHYNIGGLSLTEGSRKFLMNKPTFDFDSFHYNLSMSNYYQPSQLQFEQNQFGTNSSYFFSSMPCLNSSEFSDNINNSVSKFNSPLVNESSSNSTSTMSDYYQMSNMINENAGGLISWEGEEFINKTSSWQEGQLLSHNNSIDFSTYPLTSLSEDLSNIEANFDVFHHL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05814 349 FunFam Myb transcription factor 11 67 - -
Mepo3g05814 349 Gene3D - 11 67 - -
Mepo3g05814 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mepo3g05814 349 SMART sant 13 63 IPR001005 -
Mepo3g05814 349 SMART sant 66 114 IPR001005 -
Mepo3g05814 349 FunFam MYB transcription factor 68 129 - -
Mepo3g05814 349 Gene3D - 69 142 - -
Mepo3g05814 349 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo3g05814 349 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g05814 349 CDD SANT 17 61 IPR001005 -
Mepo3g05814 349 CDD SANT 70 112 IPR001005 -
Mepo3g05814 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mepo3g05814 349 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g05814 349 PANTHER MYB DOMAIN PROTEIN 55 1 286 - -
Mepo3g05814 349 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g05814 349 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05814 Mepo-Chr3 72388513 72389894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05814 1 205 MYB Transcription Factor Family AT1G09540 60.000 7.74e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g05814 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05814 K09422 - gmx:100811140 363.229