Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05812 ATGGAATCTAAACCCTCAAACACTATTAAGATCCTCTATAGCTACGGTGGCAAGATCCGCCTTCGCTCCACTGACGGTGAACTCCGTTACGTCGGCGGTCACACCAGAGTCCTCTCCGTCGATCGTTCCATTTCATTCTCAGAATTGATGACGAAGCTTGAAGAATTGTGTGGTTCATCTGTGACTTTGCGGTGTCAATTACCGAACGGAGATTTAGAAACGTTGATTTCCATCACGAACGATGAAGATTTATCCAACATAATCGACGAATACGAACGTGCCTCGTTGAAACTAACTCATCCTTTGAAGATCAAAGCAATTCTTTCGCAGCCGAAATCGAGTTTGAAAGTTTCACCTGATCTATCATCTTCATCGTCAAATGCCAGTCTATCTCCGGTCAGATCGCCTCATACCTCCGCTGAATCTCTGCCGTACGCGGTGGCGTATAGGATCGGACGTCACAGCCGCTCGCCGAGAGCTCCGGTAGGATATTCGATCGGCGGCGTTCGGAATGGATCAGCGAAAGCTTGTTGCTATATGGGCCAGTTACAGGGAAGCCCGAGAAGCCCAAGGCCCGTGTATTATGGGCCTCGTTTCAATAATTACTGCCATTAA 615 0.4813 MESKPSNTIKILYSYGGKIRLRSTDGELRYVGGHTRVLSVDRSISFSELMTKLEELCGSSVTLRCQLPNGDLETLISITNDEDLSNIIDEYERASLKLTHPLKIKAILSQPKSSLKVSPDLSSSSSNASLSPVRSPHTSAESLPYAVAYRIGRHSRSPRAPVGYSIGGVRNGSAKACCYMGQLQGSPRSPRPVYYGPRFNNYCH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05812 204 Gene3D - 29 110 - -
Mepo3g05812 204 CDD PB1_UP2 14 97 - -
Mepo3g05812 204 PANTHER OS05G0427100 PROTEIN-RELATED 3 139 - -
Mepo3g05812 204 SUPERFAMILY CAD & PB1 domains 25 113 - -
Mepo3g05812 204 MobiDBLite consensus disorder prediction 115 138 - -
Mepo3g05812 204 Pfam PB1 domain 26 98 IPR000270 GO:0005515
Mepo3g05812 204 SMART PB1_new 23 102 IPR000270 GO:0005515
Mepo3g05812 204 ProSiteProfiles PB1 domain profile. 18 112 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05812 Mepo-Chr3 72322452 72326099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05812 9 93 MAP Kinase Kinase Kinase AT5G57610 45.882 3.43e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05812 - - vra:106761207 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05812 3 72322452 72326099 Mepo3g05812 3 72322452 72326099 ECH
Mepo1g01429 1 14102919 14104428 Mepo3g05812 3 72322452 72326099 PCT