LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g05808	ATGCCGCCGGATTCCGCCGAACAAGACGATGATCCCGATACCGAATTCGCCGAAATTGATCCCACCCGTCGTTATGGTCGGTACAAGGAAATTTTAGGGAAGGGGGCTTTCAAAAAAGTATATAGAGCTTTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTCAAGGTGTCTGATTTATTGCGAAATTCTGAAGATTTGGAGCGACTTTATTCTGAAGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATTATAAAATTTTATAATTCATGGGTTGATACCAAGAATGAGAATATTAATTTCATTACTGAAATTTTTACATCCGGAACTTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCGTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTCGTATCTTCATAGTCATAATCCACCTGTTATTCATCGAGACCTTAAGTGTGACAATATTTTTGTCAATGGTAATCAAGGAGAGGTGAAAATTGGTGATTTAGGATTGGCAGCCATTCTTCAACAGGCCACTTCAGCTCACAGTGTTATAGGTACCCCGGAGTTTATGGCCCCAGAGCTTTATGAGGAGGAGTACAACGAGCTAGTTGACATATATGCTTTTGGCATGTGCCTGCTAGAGTTGGTAACTGTTGAGTACCCGTATGTTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCGTTGGCAAAAGTAAATGATCCTGAAGTTAAAGCATTTATAGAAAAGTGTACTGCTCATGTATCGGAACGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCAGATTGGGATGGTGACAGCGTCGGTCGATCTTCGAGATCTAGAACCCAGCATTCAGGAAATAACTTCGATAATCAATCCATTGGGAAAAGTGCCAACGATAATTCCGCTGAGACAGGTAGGGAATTCACAGTGGAAGGCCAGAGAAGAGATGTTAATACAATATTTTTAAAACTGAGAATTGCAGATTCCTCAGGCCATATTCGAAATATCCACTTCCCTTTCGATATTGGAGCAGACACTTCAATCTCTGTTGCCAGTGAAATGGTTGAGGAGTTGGAGCTTACTGATCAAGATGTTTCGACTATTGCTATGACGATTGACTCTGAAATTCGATACCACATTCCTGATTGGAATCCCAGTGAAACTCTTGACAATAGCTCTTGTCAAGATTCAGGTCATACCCTTGAAACTATGCCCGAGGCTTCTCCTATGGGAAATGAATCTCCTGGCAGCCTTGCTTTGGAAATATTACCTTCAGGTCGTAAGTACTGGTCAGACTCACCTAAGGGGGTTGGTGGAAACTCTCCATGTCTGCACGCTGCTTCAAACTTGTCATATGAAGGGGATGTGATTGCTGAGGAAGGCAGCTTCTTTGCAAATAGCGTGGGGAAGGAATGTGATGGGGCTGCTGATTCCCCTTTCAACGAAAGAAGTATTGCATCAGACTGTTCTGAAGCAACCGGTGGAATGTCCTCTCAAGAAGAAATATCTGTAAGTTTGAAAGATTCTGATACAGAAGACATCAATAAAATAGCAACAAAGCTGGAAACTTTGTTGGTTATGCAACGAGATGAGTTAGACGAACTGAAGAGGAAGCACAAATTAGCTGTCTCGGATTTTTTGAATGAATTTTCTCCAGAAATTTCCTTACAAGTTCTAAATATGTGCAACCTGCAGATGCCTGATGGTGACATGTAG	1776	0.4178	MPPDSAEQDDDPDTEFAEIDPTRRYGRYKEILGKGAFKKVYRAFDELEGIEVAWNQVKVSDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQATSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVNDPEVKAFIEKCTAHVSERLPAKALLMDPFLQSDWDGDSVGRSSRSRTQHSGNNFDNQSIGKSANDNSAETGREFTVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDIGADTSISVASEMVEELELTDQDVSTIAMTIDSEIRYHIPDWNPSETLDNSSCQDSGHTLETMPEASPMGNESPGSLALEILPSGRKYWSDSPKGVGGNSPCLHAASNLSYEGDVIAEEGSFFANSVGKECDGAADSPFNERSIASDCSEATGGMSSQEEISVSLKDSDTEDINKIATKLETLLVMQRDELDELKRKHKLAVSDFLNEFSPEISLQVLNMCNLQMPDGDM	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g05808	591	FunFam	Probable serine/threonine-protein kinase WNK1	11	107	-	-
	Mepo3g05808	591	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	8	501	-	-
	Mepo3g05808	591	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	150	162	IPR008271	GO:0004672\|GO:0006468
	Mepo3g05808	591	Pfam	Protein kinase domain	29	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g05808	591	MobiDBLite	consensus disorder prediction	291	327	-	-
	Mepo3g05808	591	FunFam	Probable serine/threonine-protein kinase WNK3	338	429	-	-
	Mepo3g05808	591	CDD	STKc_WNK	24	284	-	-
	Mepo3g05808	591	SMART	serkin_6	26	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g05808	591	FunFam	probable serine/threonine-protein kinase WNK9	109	289	-	-
	Mepo3g05808	591	Gene3D	Transferase(Phosphotransferase) domain 1	109	290	-	-
	Mepo3g05808	591	Gene3D	Phosphorylase Kinase; domain 1	10	107	-	-
	Mepo3g05808	591	ProSiteProfiles	Protein kinase domain profile.	26	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g05808	591	MobiDBLite	consensus disorder prediction	291	328	-	-
	Mepo3g05808	591	Gene3D	-	338	424	-	-
	Mepo3g05808	591	Coils	Coil	538	558	-	-
	Mepo3g05808	591	Pfam	Oxidative-stress-responsive kinase 1 C-terminal domain	342	396	IPR024678	GO:0004674\|GO:0005524
	Mepo3g05808	591	SUPERFAMILY	Protein kinase-like (PK-like)	19	285	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g05808	Mepo-Chr3	72263629	72267715	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g05808	102	590	MAP Kinase Kinase Kinase	AT3G48260	55.601	9.00e-171	489

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Mepo3g05808		Pkinase	2.4e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g05808	K08867		-	gmx:100301899	833.943