Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05802 ATGAGTACTTCTCCAATGGAGACGGAGCAAAACCCTACTACCGACCAAAACGGCGCCGTAGCTTCCCAACGTTCACCTCTACCACCATCTCCCCCTCCTCCTCTTCCACCGGAGGATAAAATTCTCGTCCCTGTCGAGGTTTGCTTGAAACCTTCCAGCACAGCTTCAATTCACGATGTCCGTTCCGCCGTTGAGGGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGGCGGACCGATTCCTGTTCCCCTTGACGAACCCTTTCTTGCAGATAACGTGCAAAGAATTTGCGTTTGTGATACAGGTGAAGGGATGCAGAATGATAACGTTCTTTTGTTCTGGCAAGTCAAGCCTGTTGTACATGTCTTTCAGCTAAGTGAAGAAGGACCGTGTGAGGATATCAGCTCTGATGGCCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCCTAATATATGAATCTGGTCTAAAGCAAAGGTTGCTACGGTATGCAGCGAGTGCTTTGCTCTTCACTGAAAAGGCAGTTGACCCATTCCTTGTTTCATGGAACCGCATAATTCTTTTGCATGGACCCCCTGGGACCGGAAAGACGTCTTTATGTAAAGCATTAGCTCAGAAACTGTCAATTCGATTCAATTCAAGATTCCCACAGGCTCAGCTTGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGTGGAAAGCTGGTGGCAAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAGGCAATCTGGTATTTGTTTTGATCGATGAAGTCGAAAGTCTTGCTGCTGCCAGAAAAGCTGCTTTGTCTGGTTCTGAACCTTCTGATTCTATTCGGGTTGTCAATGCATTATTAACTCAGATGGATAAGTTAAAATCATCTCCAAATGTGATAATTCTAACAACATCCAACATTACTGCTGCTATCGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGCCCACCAACTCTTCAAGCCCGGTATGAAATATTAAGGTCTTGTGTGCAGGAACTTATGCGTACAGGGATATTAACTAATTTTGAGGATTGTAAGAATATCGTGCTTCCAAATTACGCTAGCGCAAAACAGAGAATGAACGCACCAGATTTTCATGAAGCTACTATATTCATGCAACTGTGCAAGAAACTAGTTGAAACTGCAGAGGCATGTGAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGCACATGCTGCACTTGCAAATCCTTTTGATTGCAACCCTATCAAGTTCTTATGTACAATGATAGATACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1377 0.4328 MSTSPMETEQNPTTDQNGAVASQRSPLPPSPPPPLPPEDKILVPVEVCLKPSSTASIHDVRSAVEGMLEKRSLSYNGGPIPVPLDEPFLADNVQRICVCDTGEGMQNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELMRTGILTNFEDCKNIVLPNYASAKQRMNAPDFHEATIFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSELPD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05802 458 SMART AAA_5 192 344 IPR003593 GO:0016887
Mepo3g05802 458 Gene3D - 135 360 IPR027417 -
Mepo3g05802 458 FunFam pachytene checkpoint protein 2 homolog 136 358 - -
Mepo3g05802 458 ProSitePatterns AAA-protein family signature. 314 333 IPR003960 GO:0005524|GO:0016887
Mepo3g05802 458 MobiDBLite consensus disorder prediction 1 24 - -
Mepo3g05802 458 MobiDBLite consensus disorder prediction 25 40 - -
Mepo3g05802 458 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 36 455 IPR044539 -
Mepo3g05802 458 Pfam ATPase family associated with various cellular activities (AAA) 196 341 IPR003959 GO:0005524|GO:0016887
Mepo3g05802 458 CDD RecA-like_Pch2-like 142 340 - -
Mepo3g05802 458 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 196 214 IPR001270 GO:0005524
Mepo3g05802 458 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 310 324 IPR001270 GO:0005524
Mepo3g05802 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 426 IPR027417 -
Mepo3g05802 458 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05802 Mepo-Chr3 72175357 72180955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05802 141 353 Calmodulin-binding Proteins AT3G56690 30.734 1.52e-15 77.4