Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05781 ATGGCTAAGAATAACACCATCCACAAAAATCTCTTACTCTTATCATTCTTGTCCCTTCTTTTCTCAATCCATGCTAAACTCACCCTTCACCCTTCAGACACAAAAGCTCTTTCAACTCTACAAAACAACCTAGGACTCAACCTTGATACTACAAACCACCTATGTAACACAGAAGGTGTGTTCTGTGAGAGAAGACTCACCAACAATGAAAGCTATGCACTTAGAGTAACAAAGCTTGTTTTCAAATCAAAAAAACTCAGTGGCACACTTTCACCAACCATTGGGAAACTCACAGAGCTGAAAGAAATCTCTCTTTCACACAACAAACTCGTTGACCAAATACCATCCTCTATAGTTGACTGTAGAAAGCTTGAGATTCTGAACCTTGCTAATAATCTTTTCTCTGGTGAAGTTCCTTCTGAATTCTCTTCTCTCATTCGTCTTCGCTTTCTTGATATCTCTGGAAATAAACTGTCTGGAAACTTGAATTTCCTTAGGTATTTTCCCAATCTGGAAACTCTTTCTGTTGCAGACAATCACTTCACAGGAAGAGTTCCAGTTTCGGTTCGTTCTTTTCGCAATCTTAGACACTTTAACTTCTCCGGTAACCGGTTCCTTGAAGGCGTGCCGTTGAATCAGAAGCTTCTTGGATATGAAGATACTGATAATACTGCTCCCAAACGCTATATTCTTGCTGAGACTAAAAATTCAAGTGAAACAAGGCCTCATAGGAGTCATTCCCCAGCAGGTGCTCCAGCTCCTGGTCCTGCGGCTCCTGTCCACAAACATAAGAAGAGCAGGAGGAAGCTAGCTGGATGGATTCTTGGGTTTGTTGCTGGAGCATTCGCCGGGATACTTTCTGGTTTCGTGTTTTCGTTGCTGTTTAAGTTGGCTTTGATTTTGATCAAAGGAAAAGGAAAGGGTTCTGGACCTGCAATTTATAGTTCTTTGATTAAGAAAGCTGAAGATTTAGCTTTCTTGGAGAAAGAAGATGGTTTGGCTTCGTTGGAAATGATTGGAAGAGGTGGATGTGGTGAGGTTTACAAAGCTGAATTACCAGGAAGTAATGGAAAAATGATTGCCATTAAGAAGATTATTCAGCCACCTAAGGATGCAGCTGAGTTGGCTGAAGAAGATAGTAAGCTTTTGCATAAGAAGATGCGACAAATTAAGTCGGAGATTGACACGGTTGGTCAGATTCGTCATCGTAACCTTTTGCCGTTGTTGGCTCATATTTCTAGACCTGATTGTCATTATCTTGTGTACGAGTTCATGAAGAATGGAAGTTTACAGGATATGTTACACAAAGTTGAAAGAGGTGAAGCGGAGTTGGATTGGTTGGCAAGGCATAAGATTGCACTTGGTATCGCGGCTGGCCTTGAATACCTTCACACGAGCCATAGTCCACGTATAATTCATCGAGATCTCAAGCCTGCAAACGTTCTTCTTGATGATGAAATGGAAGCTCGAATTGCAGATTTTGGTCTTGCAAAAGCTATGCCTGATGCGCAGACGCATATCACCACTTCGAACGTGGCTGGTACGGTGGGATATATCGCGCCTGAGTATCATCAGATACTCAAATTCAGTGACAAGTGTGACATATATAGCTTTGGTGTTATGCTTGGTGTCTTGGTGATAGGAAAGCTTCCTTCTGATGATTTCTTTATGAACACAGATGAGATGAGTTTGGTCAAGTGGATGAGAAATGTGATGACTTCGGAAAATCCGAAGGAAGCAATTGATGCAAGGCTCATAGGAAATGGTTTTGAGGAACAAATGCTTTTGGTTTTGAAGATTGCTGCCTTTTGCACCATGGATAATCCTAAGGAGAGGCCTGATGCTAAGAATGTTAGGATTATGTTGTACCAAATCAAGCACTAG 1884 0.4145 MAKNNTIHKNLLLLSFLSLLFSIHAKLTLHPSDTKALSTLQNNLGLNLDTTNHLCNTEGVFCERRLTNNESYALRVTKLVFKSKKLSGTLSPTIGKLTELKEISLSHNKLVDQIPSSIVDCRKLEILNLANNLFSGEVPSEFSSLIRLRFLDISGNKLSGNLNFLRYFPNLETLSVADNHFTGRVPVSVRSFRNLRHFNFSGNRFLEGVPLNQKLLGYEDTDNTAPKRYILAETKNSSETRPHRSHSPAGAPAPGPAAPVHKHKKSRRKLAGWILGFVAGAFAGILSGFVFSLLFKLALILIKGKGKGSGPAIYSSLIKKAEDLAFLEKEDGLASLEMIGRGGCGEVYKAELPGSNGKMIAIKKIIQPPKDAAELAEEDSKLLHKKMRQIKSEIDTVGQIRHRNLLPLLAHISRPDCHYLVYEFMKNGSLQDMLHKVERGEAELDWLARHKIALGIAAGLEYLHTSHSPRIIHRDLKPANVLLDDEMEARIADFGLAKAMPDAQTHITTSNVAGTVGYIAPEYHQILKFSDKCDIYSFGVMLGVLVIGKLPSDDFFMNTDEMSLVKWMRNVMTSENPKEAIDARLIGNGFEEQMLLVLKIAAFCTMDNPKERPDAKNVRIMLYQIKH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05781 627 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 320 424 - -
Mepo3g05781 627 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Mepo3g05781 627 Gene3D Transferase(Phosphotransferase) domain 1 425 626 - -
Mepo3g05781 627 Gene3D Ribonuclease Inhibitor 32 142 IPR032675 -
Mepo3g05781 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 56 626 - -
Mepo3g05781 627 SMART serkin_6 333 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05781 627 Pfam Protein kinase domain 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05781 627 Gene3D Phosphorylase Kinase; domain 1 322 424 - -
Mepo3g05781 627 ProSiteProfiles Protein kinase domain profile. 333 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05781 627 MobiDBLite consensus disorder prediction 234 262 - -
Mepo3g05781 627 SUPERFAMILY Protein kinase-like (PK-like) 327 625 IPR011009 -
Mepo3g05781 627 Coils Coil 373 393 - -
Mepo3g05781 627 Gene3D Ribonuclease Inhibitor 143 219 IPR032675 -
Mepo3g05781 627 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 72 162 - -
Mepo3g05781 627 SUPERFAMILY L domain-like 52 208 - -
Mepo3g05781 627 FunFam Leucine-rich repeat receptor-like protein kinase 425 627 - -
Mepo3g05781 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05781 Mepo-Chr3 71992270 71994765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05781 11 627 Receptor kinase-like Gene Family AT2G31880 63.275 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mepo3g05781 Pkinase 5.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05781 - - gmx:100811980 885.56