Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05766 ATGGCAGAATCAAACGGCGACGTATTCCCATGGTTAAAATCCATGCCAGTAGCACCCGAATACCGACCTACTCCAGCTGAATTCGAAGATCCAATCGCTTACATTTTCAAGATCGAAAACGAAGCTTCAAAATTCGGAATCTGCAAAATCATCCCTCCTTTTCCACCTTCTTCCAAAAAAACCACCATCTCTAACCTAAACCGTTCATTCCCCAACTCCACATTCACCACCCGTCAACAACAGATCGGGTTCTGTCCCCGTAAACCCCGACCCGTTAAACGACCCGTTTGGCAGAGTGGGGACCACTACACTTTCTCTGAGTTTGAAGCCAAAGCCAAATGGTTTGAAAGAAGTTACATGAACAAGAAGAAGAAAAACAGTAACAGTGCTCTTGAAATAGAGACATTGTTCTGGAAAGCTACGGTCGATAAACCGTTTTCTGTTGAGTATGCTAATGATATGCCGGGTTCTGCTTTCACGGACACCGTGGAGAATAATAAACCGTTTTCTTCCGTTGCGAATAGTGCTTGGAATATGAGAAGGGTTTCAAGGGCCAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATACCGGGAGTTACTTCTCCTATGGTTTATCTTGCTATGCTTTTTAGTTGGTTTGCTTGGCATGTGGAGGATCATGATTTGCATAGTTTGAATTATCTTCATATGGGTGCTTCTAAGACTTGGTATGGTGTTCCCAGAGATGCTGCTGTTGCTTTTGAGGATGTTGTTAGAGTTCATGGTTATGGTGGAGAGATTAACCCTCTTGTTACATTTTCTATTCTTGGTGAGAAGACCACAGTGATGTCACCAGAAGTGTTTATTAGCGCAGGCGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTGACATTTCCAAGAGCCTATCACACGGGGTTCAGTCATGGTTTTAATTGTGCAGAGGCGGCAAACATTGCAACACCCGAGTGGTTGAGAGTTGCTAAAGATGCTGCTATTCGGAGGGCTTCAATAAACTATTCTCCTATGGTTTCCCATTTACAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATCCCTGGGGGAATCAGTGCGGCACCTCGGAGTTCTCGACTTAAAGATAAGAAGAAGGGTGAAGGAGAAGCTGTAATTAAAGAACTATTTGTCCAGGATGTGTTACAAAACAATGATCTGCTTCATGTCCTCGGAAATGAGTCTTCTGTAGTACTTCTTCCTCGCAACTCAGTTGACATCTCTAGTTGCTCAAAATTACGTGTTGGATGCCGGCCACCAAAAGTGAACCCTGGATTTTCCTTTAATGTATGCAATTCCGAGGGACTGAATTCATCAAAAGGTTTTGTTTCTGATGATCTGGTATTCGACAGGAATCGCGGAATTGCCCAAGAAAAAAACTTATGTTCTGTGAAAGATGAATTTACTCTGTTGTGCGAAGGGAAGGGGATTTCCTCGTTGGATGCAAATGGTAACAAATCCCCTTCAAGTTCTAAGCAACTTCAAAGAGACGGTGAAAGTGAGACTAGTCAAGGAGATGGATTGTCAGAGCAGAGACTGTTTTCGTGTGTCACGTGTGGACTATTGAACTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGGTATCTTATGTCTGCTGATTGCAGCTTCTTTAATGATTGGGTTGCTGCCTCTGGATTACCTGGTAGCAATAAATATACTGCGTCCCATGAAGATGCACATATTCCCGAGACAAATATGTATGCAGGGTGGACAAAGAAAAATGCCCAAGAAGAGGCTTTACATTCTGAAGGAGAAAATGGCAATGCAGCAGCTACAGCTCTTGCATTATTGGCTTCAGCATATGGAAGTTCTTCTGACTCTGAGGAAGATGCAGTTGACGGCCATGAATCAAATGCAATAAACTCTACATCAGAAAGTTTGCCTTCTAATTTTTGTGATTCCTATGCTAATCCCATGACAAGACTTGATAAAGATGATACCCTTTCAGAGAGTGCCAGCTACGAAGCACACAGAAATGAGTGTAATTTGAGTCATCATCCTCGGGATCAATCTTTTGAGGAACAGGATTATAAAATCACTTCAGGGGCTGCATTTGAAAATACAAGGGCAATGCCTTATTCCACCACATATAGTTCCCATGATACTAATGATACTGAGAAGTCATTGTCAATCGAGGCAATTGTTCCTGTAAATCATAAAAATGTTTTACTGGTACCGCAATGCGATGAAGAGTCGTCTAGAATGCATGTATTCTGTCTAGAGCATGCTGTTGAAGCAGAGCAGCAACTCCGCCCAATAGGTGGAGCCCACATATTGCTCTTATGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCACAGTTGGTGGCAGAAGATTTGGGGATTGATTGCACGTGGAAGAATATTGCCTACAGGCATGGCACCAAGGAGGATGAGAAAAGGATCCAGTCAGCTCTGGATAGTGAGGAAGCGAGTCTCGGGAATGGGGACTGGACTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAGTCTTAGCCGCTCTCCCCTTTATTGCAAGCAGATGCCTTACAATTCTGTTATATATTATGCATTCGGTCGTAGCTCTCCAGCAAGCTCACCGATAGAACCAAAGGTTTATCAGAGAAGGGCTGACAAGCAGAAAAAGGTTGTTGCTGGCAAATGGTGTGGTAAAGTTTGGATGTCTAATCAGGTCCATCCCCTTTTAGCAATAAGGGATTCTGAAGATGTTGTGGATGAGAAAAATTTATGTGGATTGGTATTGCCTGATGTGAAAACTGAGAGATCAGGAAGTACCCCCAAAGCTGCAGCGGCTATCACAAAATCAGGTAGGAAAAGGAAAACAACCTCAGAGAGTGGGCGGCGAATCAGGAAGGGAAATTTTGATGATAAGGATGTGGTTTTGGATAATTCTGCTGAAGATAAACCCAGTCCTCGGCCAAGAAGGTTTCTTAGAAGCAAGCAAGCTAAGGGTGTTGAGAAAGATGGTGCAGCTTTGCAGAGGAATTGTAGTCCATATCATCATAGAAAACCTATAAGCAAACAAACCAATTGCACTGAAAGTGATGTAGTTTCTGATGATTCGATTGATGATGATTACATGCAAAATAGATGGAGTTTTAATGTCAAAAAAGCTAAATTTGCTGGCAATGAAGTGGTTTCAGATGATGCAGTGGACTATGATTCGGATTGTCATCAGATGGAAGAACTTAGAAGCAATCAAGATGAAGATACAGAGAGAGACTCAGTTTCAGAGGATTCTTTGGATGTTGGTTCTCTTCCGTTGCACCGAAAGACTTCCAGAAGCAAGCATGCCAACTATATTAGTGAAGATGCAATTTCTGATGACCAAATGGAGAATGGTTGTCAGAAGCAGAAAAAGAGAATTGCTAAAAGCTGGCAAGGCAAACACCTTGCTGAAAAAGATTCAGTGATATCAGATGACCAACTGGAGCCGAACAAGCAGAAGCAGCGACGGAGTAATCCTAAAAGTAGGAAAGCCAGAAACCTCGCCAAAGAGGATACTGTATCAGACGATCAAACAAATGTCTATCGTCGCAAGTACCAAAGAAGGACAGTTAAAGTCAGGCAAGCCAAATGTGCAGCAGGGGAAGATGTAATGTCTGACGACCAATTGGAGGTTTCCTATCAAAGGCATAAAACAGGTATTTCTAGAAGGAAGAACAAAGGCATTGATAGAGTGAAAAATGAGATGTCTGATGATCAACTGGATGATCACTTTCCGAAGCAGCAGAGAAAAAATCCTAGGAGCAGGCGCATTAAACAGACTGATGAGGAAGATATCGATGACTCAGCTGACAATAATGCTCATCTGCTGCATAGAACCCCTAAAAGGAAGAAAGCTAAATGGAAGGATGAAGATGATATGATTTTAGATAACGAAATGGAAGATGATTCTCTTCAGCAGCGCAAGAGAACTCTTCCAAGTAAACAATCCAAACGAAAGACACTTAAACAGATGAAACAATCCAAAACTCTCCAAATGAAAAACCAGACACCTCAGCCAGTGAAACGAGGAGCTCAGAAGAATGCTAAGCAAGTAAAGCAGCAGTCTAATTTGCGGAGTAAACAATCTGACAACTCCAGAGAGCCTAGTATAGATATGGAAGAGGAGGAAGAAGGTGGACCTAGTACACGCCTTAGAAAGAGAGTTCTAAAAGCTCAGGAGTCTGAAGTAAAATCAAAAGACAGGCAAACCAAAAGGAAAAGGGCAAATGATGTTGCAGCTGTAAAGGTTTCAGCTTGCAATCCCAAATCAGAGGACGAGGAAGCAGAATATCAGTGTGACATTGAGGGATGCACCATGAGTTTCGAGTCAAAAGAAGAGTTGGTGCATCATAAGAGAAACATCTGTCCAGTAAAAGGTTGCGGAAAAAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGGCGAGTTCATGAAGATGACCGTCCTCTGAAGTGCCCCTGGAAGGGTTGCAAGATGTCTTTCAAGTGGGCATGGGCTCGAACCGAGCATATTCGAGTTCACACCGGTGCACGGCCTTATGCATGTGCCGAGCCAGGTTGTGGTCAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTTAGCGAAGAAGATTCGTCAATAG 4716 0.4279 MAESNGDVFPWLKSMPVAPEYRPTPAEFEDPIAYIFKIENEASKFGICKIIPPFPPSSKKTTISNLNRSFPNSTFTTRQQQIGFCPRKPRPVKRPVWQSGDHYTFSEFEAKAKWFERSYMNKKKKNSNSALEIETLFWKATVDKPFSVEYANDMPGSAFTDTVENNKPFSSVANSAWNMRRVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYSPMVSHLQLLYDLALALCSRIPGGISAAPRSSRLKDKKKGEGEAVIKELFVQDVLQNNDLLHVLGNESSVVLLPRNSVDISSCSKLRVGCRPPKVNPGFSFNVCNSEGLNSSKGFVSDDLVFDRNRGIAQEKNLCSVKDEFTLLCEGKGISSLDANGNKSPSSSKQLQRDGESETSQGDGLSEQRLFSCVTCGLLNFSCVAIVQPREPAARYLMSADCSFFNDWVAASGLPGSNKYTASHEDAHIPETNMYAGWTKKNAQEEALHSEGENGNAAATALALLASAYGSSSDSEEDAVDGHESNAINSTSESLPSNFCDSYANPMTRLDKDDTLSESASYEAHRNECNLSHHPRDQSFEEQDYKITSGAAFENTRAMPYSTTYSSHDTNDTEKSLSIEAIVPVNHKNVLLVPQCDEESSRMHVFCLEHAVEAEQQLRPIGGAHILLLCHPDYPKIEAEAQLVAEDLGIDCTWKNIAYRHGTKEDEKRIQSALDSEEASLGNGDWTVKLGINLFYSASLSRSPLYCKQMPYNSVIYYAFGRSSPASSPIEPKVYQRRADKQKKVVAGKWCGKVWMSNQVHPLLAIRDSEDVVDEKNLCGLVLPDVKTERSGSTPKAAAAITKSGRKRKTTSESGRRIRKGNFDDKDVVLDNSAEDKPSPRPRRFLRSKQAKGVEKDGAALQRNCSPYHHRKPISKQTNCTESDVVSDDSIDDDYMQNRWSFNVKKAKFAGNEVVSDDAVDYDSDCHQMEELRSNQDEDTERDSVSEDSLDVGSLPLHRKTSRSKHANYISEDAISDDQMENGCQKQKKRIAKSWQGKHLAEKDSVISDDQLEPNKQKQRRSNPKSRKARNLAKEDTVSDDQTNVYRRKYQRRTVKVRQAKCAAGEDVMSDDQLEVSYQRHKTGISRRKNKGIDRVKNEMSDDQLDDHFPKQQRKNPRSRRIKQTDEEDIDDSADNNAHLLHRTPKRKKAKWKDEDDMILDNEMEDDSLQQRKRTLPSKQSKRKTLKQMKQSKTLQMKNQTPQPVKRGAQKNAKQVKQQSNLRSKQSDNSREPSIDMEEEEEGGPSTRLRKRVLKAQESEVKSKDRQTKRKRANDVAAVKVSACNPKSEDEEAEYQCDIEGCTMSFESKEELVHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMSFKWAWARTEHIRVHTGARPYACAEPGCGQTFRFVSDFSRHKRKTGHLAKKIRQ 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05766 1571 ProSitePatterns Zinc finger C2H2 type domain signature. 1480 1502 IPR013087 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1031 1045 - -
Mepo3g05766 1571 FunFam Probable lysine-specific demethylase ELF6 1505 1534 - -
Mepo3g05766 1571 SUPERFAMILY beta-beta-alpha zinc fingers 1494 1536 IPR036236 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 633 655 - -
Mepo3g05766 1571 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1401 1434 - -
Mepo3g05766 1571 ProSitePatterns Zinc finger C2H2 type domain signature. 1510 1532 IPR013087 -
Mepo3g05766 1571 FunFam Probable lysine-specific demethylase ELF6 11 344 - -
Mepo3g05766 1571 ProSiteProfiles Zinc finger C2H2 type domain profile. 1508 1537 IPR013087 -
Mepo3g05766 1571 SMART c2h2final6 1538 1564 IPR013087 -
Mepo3g05766 1571 SMART c2h2final6 1478 1502 IPR013087 -
Mepo3g05766 1571 SMART c2h2final6 1508 1532 IPR013087 -
Mepo3g05766 1571 SMART c2h2final6 1455 1477 IPR013087 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1091 1205 - -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 499 523 - -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 966 1016 - -
Mepo3g05766 1571 Pfam JmjC domain, hydroxylase 204 322 IPR003347 -
Mepo3g05766 1571 ProSiteProfiles Zinc finger C2H2 type domain profile. 1538 1569 IPR013087 -
Mepo3g05766 1571 Gene3D Cupin 11 344 - -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1188 1205 - -
Mepo3g05766 1571 SUPERFAMILY Clavaminate synthase-like 150 336 - -
Mepo3g05766 1571 SMART cupin_9 171 340 IPR003347 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1242 1434 - -
Mepo3g05766 1571 Gene3D Classic Zinc Finger 1476 1562 - -
Mepo3g05766 1571 ProSiteProfiles Zinc finger C2H2 type domain profile. 1478 1507 IPR013087 -
Mepo3g05766 1571 ProSiteProfiles JmjC domain profile. 171 340 IPR003347 -
Mepo3g05766 1571 ProSitePatterns Zinc finger C2H2 type domain signature. 1540 1564 IPR013087 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1249 1301 - -
Mepo3g05766 1571 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1240 - -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1350 1388 - -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 948 1045 - -
Mepo3g05766 1571 SMART JmjN_1 17 58 IPR003349 -
Mepo3g05766 1571 FunFam Probable lysine-specific demethylase ELF6 1535 1564 - -
Mepo3g05766 1571 Pfam jmjN domain 19 52 IPR003349 -
Mepo3g05766 1571 SUPERFAMILY beta-beta-alpha zinc fingers 1526 1560 IPR036236 -
Mepo3g05766 1571 MobiDBLite consensus disorder prediction 1155 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05766 Mepo-Chr3 71847562 71857225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05766 762 863 C2H2 Transcription Factor Family AT5G04240 33.333 4.28e-14 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g05766 JmjC 3.1e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05766 - - psat:127084261 2422.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05766 3 71847562 71857225 Mepo3g05766 3 71847562 71857225 ECH