Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05763 ATGGGTCGCAATCAACAAGTACAAGTGTGTAGTTCTTGCACTCACAACTGTAGATTCTTTGATCACTTTCTACGACCAACATCAACCTCGCCAAACTCTTTCTACAAGCTTATGTATTATCCAAGCGATTTCAAAATTTTGGATCTTCCTCTTAAGTTAAACCCTACCATGTCATTGTTGGTTGGTCAGAAAATCAATCTCGAGGATTCAACCTCAACCGGTAAGAGATGGCCTGTAAGAGTATCAAAAGTTGATGGTTCTTTTGCTTTTAAGGAAGGATGGGATGTTTTCTCATCGGCTCACAAGCTTGAAAAAGGAGATTTGCTTGTATTCAACTGCATTAACAAGTATATCTTTGATGTCAAGATCTATGACAAGTCTATGTGTGAAAGGATTGATTTTTCTGAAAAAAGAAATAGGAAAAGGAGAAGTAGATGCAGCAGTGGCTCACTTGATGTAGGAGGAACACCAAATAGCGTAGAAGTTGTTTCAGAAAATGGTAATGTGGATAGAAGGGTCAAATCTTTGCGCACAGTAGAAGACATATGTTACATAAGAAACCATGTAGATCTAAATGAGGCATCCGTTTTTAACAACGATCCTATGTTTGAAGAAGTGTTGGGCTCGGGGGATACGTCATACGCTTCTAAATTTGGATTGTTGGAAAGAAAAGATTTTTGGAGTCAAGTTCAAGATAGCCAAGTCACTGAGAGTTTAGGAGATCAAGCGGAGATATTCAAAGGAAAACATGTTTCATGGGCATTTGAACTTGAAACTTCATTTGAACTTGAAACTTCTGGAAGAAACAAAGAGGGTGAATCCATTACGTCCAATAAGGAAATTAAAGAGCGCCTGTTTGCTGAAGGCTTAGGAAGTGATCCGGCGGATGAAGAGAGGTGCAAAGAGATCAGAAATCTCCTAAATCCTCAAATTCACATTGAGCGGCCAAAGGTTGTTAAGGGAGAGTTGAATCGAGATAATAACGAGAACAGATCAATTATTTCCAATGGAGAAGTTCAGGAGTGCCAGCTTGGCGTGAGCTTAGGAAGTGATCAGGCGGCGATATCCAAAGTAAATCATGACTCAGATGCATTTGAACTTGAAAGTTTTCGAAAAAATAATTTTCTTGGCGAATCAGAAAAAAACACATATGACAAGACTTCTACTTTGAAACTTGAAGAAAATAAAGAGGGCAGATCCATCATGTTCAAAAAGGAAGTTCAAGAGTGCCAGTTTTCTGACGGCTTCGGGGCGATGTCTGAAGAGTTGCTCAATGAGATGACAAATGATCTAGATGCCCAAATGCACATTGATGGAATAAATCAAGTGCATATGAACATGACTCCCGAAATGAGCAGTGTCAGTGATAAATTGAATGAACCAGAGTTGCCAAAGCCAAATGTTATTAAGGGAGAGTTTAATCAAGATATTAAAAGTCACTTTGAAACTGCAGCCACTATCTCCTTTGAGAACACCAAACAGAGGCTCAATGAAATGTCCAATCTCTCAGATGACCAAAGTCACCTTGGTGAAAAGAAGAAAATGCCAATGGAAATGACTCCCAATTTGTTCATTTGCAATGAAAAATTGAATGCAACAGGGCCGCCAGAGGTTATTGTTAAGAAAGAGTATAGTGAAGATGAAACTGTGACCTGTGTGGTGCTTGCTGATAACAATTATCTTAAATTGTCAGAATGCTTGCCGCTATCTCGCCCTGGATTACGATCAAAGAGGATGGTGGTGATACTTAAGGATGCACTGGAGAGATTGTGGCCGGTCCTTTGCCTTGAACAAACTTTGTTGACAAGTGGATGGTCAGACTTTCGAATAGCAAATAATATTAATTCAGGTGATGCGTGTGATTTTCGGGTTGAGGACAAGTCTAAATGTATTGTTGCTGTAGATATTCACCACAAGTGA 1920 0.3932 MGRNQQVQVCSSCTHNCRFFDHFLRPTSTSPNSFYKLMYYPSDFKILDLPLKLNPTMSLLVGQKINLEDSTSTGKRWPVRVSKVDGSFAFKEGWDVFSSAHKLEKGDLLVFNCINKYIFDVKIYDKSMCERIDFSEKRNRKRRSRCSSGSLDVGGTPNSVEVVSENGNVDRRVKSLRTVEDICYIRNHVDLNEASVFNNDPMFEEVLGSGDTSYASKFGLLERKDFWSQVQDSQVTESLGDQAEIFKGKHVSWAFELETSFELETSGRNKEGESITSNKEIKERLFAEGLGSDPADEERCKEIRNLLNPQIHIERPKVVKGELNRDNNENRSIISNGEVQECQLGVSLGSDQAAISKVNHDSDAFELESFRKNNFLGESEKNTYDKTSTLKLEENKEGRSIMFKKEVQECQFSDGFGAMSEELLNEMTNDLDAQMHIDGINQVHMNMTPEMSSVSDKLNEPELPKPNVIKGEFNQDIKSHFETAATISFENTKQRLNEMSNLSDDQSHLGEKKKMPMEMTPNLFICNEKLNATGPPEVIVKKEYSEDETVTCVVLADNNYLKLSECLPLSRPGLRSKRMVVILKDALERLWPVLCLEQTLLTSGWSDFRIANNINSGDACDFRVEDKSKCIVAVDIHHK 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05763 639 CDD B3_DNA 22 125 IPR003340 GO:0003677
Mepo3g05763 639 Gene3D - 26 129 IPR015300 -
Mepo3g05763 639 ProSiteProfiles B3 DNA-binding domain profile. 23 127 IPR003340 GO:0003677
Mepo3g05763 639 SUPERFAMILY DNA-binding pseudobarrel domain 29 129 IPR015300 -
Mepo3g05763 639 PANTHER B3 DOMAIN-CONTAINING 32 627 - -
Mepo3g05763 639 SUPERFAMILY DNA-binding pseudobarrel domain 564 634 IPR015300 -
Mepo3g05763 639 ProSiteProfiles B3 DNA-binding domain profile. 581 638 IPR003340 GO:0003677
Mepo3g05763 639 Gene3D - 541 639 IPR015300 -
Mepo3g05763 639 Pfam B3 DNA binding domain 62 123 IPR003340 GO:0003677
Mepo3g05763 639 SMART B3_2 23 127 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05763 34 130 B3 DNA Binding Superfamily AT4G01580 30.303 5.52e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g05763 B3 1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05763 - - tpra:123897020 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05763 3 71783071 71787524 Mepo3g05763 3 71783071 71787524 ECH