Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05752 ATGGCCAATACCAACCATACTCAAACACAGTCACACTCCACCACCATCGACCCAAACACCGGTTACTGTTCTCTTTCCAGAACCTTCCACAGCCTCCGCCCAATCGCCCCTCTCCCTCCACCCTCCGATACTCTCTCCCTCACTGACTATGCACTCTCTCTCCTCTCCACCACCACCGCCGTCTCCAACAACACCACCGCTCTCATCGACGCCGCAACCGACCACCACCTCACTTACCCCACCTTCCTCCGCCAAATCAAATCCCTCTCTTCCTTTCTCCAATCTCACACTACTCTCTCCAAAGGCCACGTCGCTCTCATCCTCATCCCTTCTTCCATACATGTCCCCGTACTCTATTTCTCCCTCCTCTCCCTCGGCGTCACCATCGCTCCCGCTAATCCGCTCTCCTCTCCTTCTGAGTTATCTCATCTCGTTCATCTCATCAATCCGGTCATTGCATTCTCTGTTTCCTCGACCGCAACAAAAATCCCCAAACTACCCCTCGGCACTGTCATAACTGATTCTCCTTCTTTTCTTTCCGTGCTCAATTCCACCATTGATACCGATACCGAACTTCGCCCGGTCGAAACAAGTCAATCAGATACAGCAGCAATCCTCTTCTCATCCGGAACAACAGGACGAGTCAAAGGAGTATTATTAACTCACGGTAACTTCATCGCTTTAATCGGAGGATTCTGTTTCATGAAGCATGCTTATGATGACGGTATTGAAGATGAACCGCATCCGGTGTCGTTGTTTCCGCTTCCGCTATTTCATGTGTTTGGATTTTTTATGATGGTGAGAGCTTTGGCCATGGGGGAGACGTTGGTGTTGATGCAGAGGTTTGATTTTGAAGGGATGTTGAGGGCGGTTGAGAAGTATAGGATTACGTATATGCCAGTGTCGCCACCGTTGATTACGGCGTTTACTAAGTCGGAGTTGGTGAAGAGGTATGATATTAGTTCGATTCGGTTGTTGGGGAGCGGTGGTGCGCCGCTTGGGAAGGAGGTTGCGGAGAGCTTCAAAGCTAAATTCCCCAGTGTGGAAATTGTGCAGGGATATGGTCTGACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGTTTTGATGAAGCTAAGCGCCACGGTTCTGTGGGTCGACTAGCAGAAAATATGGAAGCTAAGATAGTTGACCCTGTTACTGGAGAGGCATTATCTCCTGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCAACAATCATGAAAGGTTATGTAGGAGATGACAAGGCGACTGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACCGGTGATCTTTGTTATTTTGACTCAGATGGTTATCTGTTCATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACATACTTCATACCAATCCTGAAATTGCTGATGCTGCAGTAGTCCCGTATCCTGATGAAGATGCAGGGCAAATTCCAATGGCTTTTGTGGTAAGAAAGCCAGGAAGCAACATTACTGCAGCTCAGGTCATGGACTATGTTGCGAAGCAGGTGACACCGTACAAGAAGATACGACGTGTTTCTTTTATCAACTCTATTCCAAAATCTCCTGCTGGCAAAATTTTAAGAAGAGAATTAGTTGATATTGCTCTAACTGGTGGTTCATCTAAATTGTGA 1689 0.4772 MANTNHTQTQSHSTTIDPNTGYCSLSRTFHSLRPIAPLPPPSDTLSLTDYALSLLSTTTAVSNNTTALIDAATDHHLTYPTFLRQIKSLSSFLQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAPANPLSSPSELSHLVHLINPVIAFSVSSTATKIPKLPLGTVITDSPSFLSVLNSTIDTDTELRPVETSQSDTAAILFSSGTTGRVKGVLLTHGNFIALIGGFCFMKHAYDDGIEDEPHPVSLFPLPLFHVFGFFMMVRALAMGETLVLMQRFDFEGMLRAVEKYRITYMPVSPPLITAFTKSELVKRYDISSIRLLGSGGAPLGKEVAESFKAKFPSVEIVQGYGLTESGGGAARMIGFDEAKRHGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGYLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRRELVDIALTGGSSKL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05752 562 Pfam AMP-binding enzyme 62 460 IPR000873 -
Mepo3g05752 562 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Mepo3g05752 562 Gene3D - 456 556 IPR045851 -
Mepo3g05752 562 FunFam 4-coumarate--CoA ligase 2 456 557 - -
Mepo3g05752 562 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 22 552 - -
Mepo3g05752 562 Gene3D - 41 455 IPR042099 -
Mepo3g05752 562 CDD 4CL 39 550 - -
Mepo3g05752 562 SUPERFAMILY Acetyl-CoA synthetase-like 50 555 - -
Mepo3g05752 562 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05752 Mepo-Chr3 71667958 71672732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05752 11 562 Monolignol Biosynthesis Gene Families AT5G63380 59.358 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05752 K01904 - gmx:100804044 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05752 3 71667958 71672732 Mepo3g05752 3 71667958 71672732 ECH