Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05749 ATGGGGTTTTATGACTTGGTTTTGCTATTCTGTTATGTTTGGTATGTCTTTTATGTGGGAAGTTGCATTGCTCAGTTACAATCCTCTCAGACACAAGTTCTTCTGCAGTTGCAAAAACACTTAGAATATCCAACACAGTTAGAAATATGGAAAGATCGTAGGACAGAACTTTGCTTTCTCCCTTCAACACAAGTCAAAATCTCATGCAAGGACAATTTTGTCACAGAGCTAACTATCTTTGGTGATAAGCCAAACAAGGGTAGAGATTTTGATGGTTTTGCTATTCCAAATCAAACACTATCACAAAGCTTCTCAATGGACTCATTTGTTGCAACTCTTGCAAGGTTAACTAGCTTGAGAGTTCTTCATCTTGTTTCTTTGGGAATTTGGGGACCACTTCCTGATAGAATTCATAGATTATTTTCACTTGAAACTTTGGATTTGAGTTCAAATTATCTTTATGGATCAATCCCTCCAAAAATTTCTACTATGGTCAGCCTTCAAACTCTTATGTTAGGTGATAACTTCTTCAATGGTACTATCCCAAACTTGTTTGATTCATCAAGTAATCTCACAGTTCTTAGTTTGAAGAACAATAAGTTGAAGGGTCCATTTCCATTTTCAATCCTCAGTATCACAACTTTGACTAACATTGACATGTCAAGAAATCAGTTATCCGGAAGCTTACAAGATTTTACTGGTTTGAGTAGTTTGGAACACTTAGATTTAAGAGAAAATGAATTAGATTCTGATTTACCTGCATTGCCTAAAGGGTTGATATCGCTTTTCCTCAACCGGAATTCCTTCTCAGGTCAAATTCCAAAAAACTATGGTCAACTAAATAGTCTTCAGCACCTTGATATTTCCTTCAATGCACTCACAGGAGCTACTCCTTCTGAACTTTTTTCTTTGCCTAACATTATTTACTTGAATTTGGGATCCAACATGCTGAGTGGAACACTTGAAAATCATCTTAGATGTGGCCACAATCTAAGTTTTGTTGACATATCAAATAATAGGCTAATTGGAGCCTTGCCTTATTCTCTGAGCAATGTGTCAGAAAATAGAGTTGTGGAGAGTGATGGAAACTGTTTATCTGGTAGTTTTCAGCATCAGCATGCAGTATCTTATTGCGCAGAAGCTCCTGATAAGAAGAAATCGAACCGAGTTGGAATTTTTGTTGGTGTCATCGTTGGAATTCTTGTTATCATTGTCGTTTTTGGTTTATGCATTGTTGTTATATGTAAGAGGTATTACTCTAGAGGGATTGCGGAGCAGCACCTATTGCATAAATCAGTTCAAGATAGCTATTCAGCAGGGTTCTCATCTGAGCTTATTGCAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTAGGCAGAGAAGACCTTCCATCGTGTCGATCATATTCGTTGGAGGAGCTTATGGAAGCAACAAATAACTTTGACAATTCTACTTTTCTTGGTGAAAATATATATGGAAAGCTTTACAAAGGAAAATTGGAGAGTGGGATAGCTGTTGTAATAAGGTGCATACCTTTATCAAAAAAGTACTCAATTCGAAATTTCAAACTGAGGCTGGATTTGCTTGCAAAGCTCCGCCACATGCATTTGGTATCCCTCTTGGGACACTGCATTGATGGTATTTTAGGAGAGCGTAACGACTCAAAGGTCTTTCTCGTTTATGAATGTGTATCAAATGGGAATTTCCAAACACATCTCTCAGGAGATAGTTGTGGCAAGATTTTCAATTGGTCAGAGAGATTGTCAGTTTTAATTAGTGTTGCTAAGGCTATTCACTTCTTACACACTGGAATGATACCTGGTTTCTTCAGAAATAGACTTAAGACCAACAATATTTTGTTTAATGAAAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCCATTGTCTCAGAAGAAACTGATGCAAGTGGGGTAATAGGAGAAAGCCCTAATTCATGGCAAATGAAAAAGCTAGAGGATGATATTTATAGCTTTGGATTCATAATACTTGAGGCACTTGTTGGACCTTCCATGTTTGCTAAAAGAGAAGCAGCTGTGCTAAATGCAATGGCTTCCTTCAGTAGTCAAGATGAGTGGAAACAAATAGTGGACCCAGTTGTGCAAGCTACTTGCTGTAAAGAATCTCTATCTATTGTGATTTCTATAACTAACAAGTGTATATCAACCGAGTCGTGGAATCGACCATCGATTGAGGATGTCCTTTGGAACTTGCAGTATGCTTCTCAAGTCCAGAACAACAGCTGA 2268 0.3757 MGFYDLVLLFCYVWYVFYVGSCIAQLQSSQTQVLLQLQKHLEYPTQLEIWKDRRTELCFLPSTQVKISCKDNFVTELTIFGDKPNKGRDFDGFAIPNQTLSQSFSMDSFVATLARLTSLRVLHLVSLGIWGPLPDRIHRLFSLETLDLSSNYLYGSIPPKISTMVSLQTLMLGDNFFNGTIPNLFDSSSNLTVLSLKNNKLKGPFPFSILSITTLTNIDMSRNQLSGSLQDFTGLSSLEHLDLRENELDSDLPALPKGLISLFLNRNSFSGQIPKNYGQLNSLQHLDISFNALTGATPSELFSLPNIIYLNLGSNMLSGTLENHLRCGHNLSFVDISNNRLIGALPYSLSNVSENRVVESDGNCLSGSFQHQHAVSYCAEAPDKKKSNRVGIFVGVIVGILVIIVVFGLCIVVICKRYYSRGIAEQHLLHKSVQDSYSAGFSSELIANARYVSEAAKLGREDLPSCRSYSLEELMEATNNFDNSTFLGENIYGKLYKGKLESGIAVVIRCIPLSKKYSIRNFKLRLDLLAKLRHMHLVSLLGHCIDGILGERNDSKVFLVYECVSNGNFQTHLSGDSCGKIFNWSERLSVLISVAKAIHFLHTGMIPGFFRNRLKTNNILFNENWMAKLSDYGLSIVSEETDASGVIGESPNSWQMKKLEDDIYSFGFIILEALVGPSMFAKREAAVLNAMASFSSQDEWKQIVDPVVQATCCKESLSIVISITNKCISTESWNRPSIEDVLWNLQYASQVQNNS 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05749 755 Gene3D Ribonuclease Inhibitor 27 258 IPR032675 -
Mepo3g05749 755 Gene3D Ribonuclease Inhibitor 259 388 IPR032675 -
Mepo3g05749 755 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 259 383 - -
Mepo3g05749 755 ProSiteProfiles Protein kinase domain profile. 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05749 755 SMART LRR_typ_2 140 164 IPR003591 -
Mepo3g05749 755 SMART LRR_typ_2 280 304 IPR003591 -
Mepo3g05749 755 SMART LRR_typ_2 235 262 IPR003591 -
Mepo3g05749 755 Pfam Protein kinase domain 484 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g05749 755 Gene3D Phosphorylase Kinase; domain 1 446 562 - -
Mepo3g05749 755 Gene3D Transferase(Phosphotransferase) domain 1 564 755 - -
Mepo3g05749 755 SUPERFAMILY Protein kinase-like (PK-like) 464 746 IPR011009 -
Mepo3g05749 755 SUPERFAMILY L domain-like 113 369 - -
Mepo3g05749 755 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 99 746 - -
Mepo3g05749 755 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 257 - -
Mepo3g05749 755 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 564 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05749 Mepo-Chr3 71631434 71636503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05749 7 693 Miscellaneous Gene Families AT5G14210 50.857 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mepo3g05749 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05749 - - gmx:100802978 1157.9