Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05745 ATGGCTACTCTCACCTCCCTCCCTCCACTTCCTCACACCCTCCTCTCCCTCCGCTCTAAACCAACCAGACTCTCCGTTTCAGCTTCAGCACTCTCAGCCTCAGGAAATGATGGATCTAATTCTAGAGTACCACACAAAAGAAGGAGAAGAATTGAAGGTCCAAGAAAAAGTATGGAAGATTCTGTTCAACGTAGGATGGAGCAATTTTATGAAGGAAATGACGGACCGCCTTTACGTGTTCTTCCTATTGGTGGTTTGGGTGAAATTGGAATGAACTGTATGCTTGTTGGGAATCATGACCGTTATATCCTCATTGATGCCGGTATCATGTTTCCTGACTATGATGACCTCGGAGTACAAAAGATTATACCTGATACAACGTTTATAAGAAAATGGAGCCACAAAATTGAAGCGCTTGTTATAACGCATGGTCATGAAGATCATATTGGTGCGTTGCCCTGGGTCATCCCAGCATTGGATTCCAATACACCAATTTTTGCATCTTCTTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGTATTTTCCTTACATCTAGACTCAAAATATTTAGAACAAAGAACAAGTTTGTCGCTGGGCCATTTGAAATAGAACCAATCAGGGTGACTCATTCTATTCCCGATTGTTGTGGACTAGTTCTTCGTTGTTCTGATGGGACTATTCTTCACACTGGGGATTGGAAGATTGACGAGACACCACTTGATGGGAAAGTTTTTGATCGGGAGGGTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTGCTCTCACCTGGAAGGACAACCAGTGAATCAGTTGTGGCAGATTCATTATTGAGGCATATTTCAGCTTCAAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATCTACATCGGATTGGAAGTGTCAAAGCTGCTGCCGATTTAACTGGGAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATACTTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCATTTGACCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCACCTAAGGATCTGCTTATTGTAACAACTGGCTCTCAAGCAGAGCCACGTGCTGCCTTAAATCTTGCATCTTTTGGAAGTAGCCATGCTTTCAAACTTACCAAGGAAGATATTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCCCGTGTGATGGAAATGATGAATCGCATATCAGAGATTGGATCAACAATAGTTATGGGGAGAAATGAAAACTTGCACACATCTGGACATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATTGTGAAGCCGCAACATTTTCTTCCTGTACATGGAGAATACTTGTTCCTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGGCATACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTGAGAAATAGAAGGGTTCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAAAATTTACAGTTGAAATATAGTGATGGTGACAAAGCATTCGGTACATCCGGTGAACTCTTCCTTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGATTAGCATGGAAATATTTCGCCCTAAAAATTTAGAAAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGTCTATGGCTGGACAAAGGGAAGCTGTTAGATGCACTATATAAAGCTGCTCATGCAGCTCTTTCTAGTTGTCCCGCCAAAAGTCCACTGCCTCACACGGAAAGAACTGTGTCAGAGGTGTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCCGAAGTAATTGCCATTGCCATAGAAAATCCTGGAGCTGTTTTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCACGTTAGTCCTGGAATATCAACATTTAGAAGATCAGTGGATGAAAATAGAAAGGAAAACCAGTCCACCACACTGCAAATAAGAGATGATGGCATTGATACAGAAGGACTATTACTTGAGAATGAGACCACTACAACTGCAGCTGAAGGCGATTTATCTGATTCAGGGGAATCGGATGAATTTTGGAAGCCATTCATTGCATCATCAGTTGAGAAATCAATCAAAGCAAACAATGGTTATGTTTCACGAAAGGAGCATAAGTCAAATACAAAGCAAGATGATTCTGAAGACATAGATGAAGCTAAGTCTGAAGAAATGTCTGATTCTGAGCCAGAGTCTCCAAAATCAGTAAAGAAAAATAAATGGAAAACTGAGGACGTTAAGAAGCTAATTGATTTGCGAAGTAACCTCCGTGACAGATTTAAAGTTGTGAAAGGAAGGATGGCTCTCTGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAATGCAAATCTTTGTGGACATCTTTGGCACTTAAATATGAGGAGATCAAGAATGGGAAAGATAGCAGAAAAAATTGGCAATATCTTGAGGACATGGAAAGGATATTGTCTAGCGATGAAACACCGGCAACAAATTGA 2604 0.4094 MATLTSLPPLPHTLLSLRSKPTRLSVSASALSASGNDGSNSRVPHKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLTSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMNRISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERMRIALDGIIVISMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPAKSPLPHTERTVSEVLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSHVSPGISTFRRSVDENRKENQSTTLQIRDDGIDTEGLLLENETTTTAAEGDLSDSGESDEFWKPFIASSVEKSIKANNGYVSRKEHKSNTKQDDSEDIDEAKSEEMSDSEPESPKSVKKNKWKTEDVKKLIDLRSNLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQYLEDMERILSSDETPATN 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05745 867 CDD RNaseJ_MBL-fold 81 492 - -
Mepo3g05745 867 Gene3D - 776 837 - -
Mepo3g05745 867 SMART Lactamase_B_5a 90 287 IPR001279 -
Mepo3g05745 867 MobiDBLite consensus disorder prediction 26 40 - -
Mepo3g05745 867 Gene3D - 82 494 IPR036866 -
Mepo3g05745 867 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 429 481 IPR011108 -
Mepo3g05745 867 MobiDBLite consensus disorder prediction 735 774 - -
Mepo3g05745 867 MobiDBLite consensus disorder prediction 652 689 - -
Mepo3g05745 867 Pfam Beta-lactamase superfamily domain 101 237 IPR001279 -
Mepo3g05745 867 CDD GT1 774 839 - -
Mepo3g05745 867 PANTHER RIBONUCLEASE J 13 866 - -
Mepo3g05745 867 MobiDBLite consensus disorder prediction 735 751 - -
Mepo3g05745 867 Pfam Myb/SANT-like DNA-binding domain 774 857 IPR044822 -
Mepo3g05745 867 ProSiteProfiles Myb-like domain profile. 768 832 IPR001005 -
Mepo3g05745 867 MobiDBLite consensus disorder prediction 26 61 - -
Mepo3g05745 867 Gene3D - 279 429 IPR042173 -
Mepo3g05745 867 SUPERFAMILY Metallo-hydrolase/oxidoreductase 78 492 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05745 Mepo-Chr3 71585878 71595494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05745 775 860 Trihelix Transcription Factor Family AT2G38250 30.682 2.09e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo3g05745 Lactamase_B_2 1.3e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05745 - - gmx:100783850 1419.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05745 3 71585878 71595494 Mepo3g05745 3 71585878 71595494 ECH
Mepo1g01483 1 14624257 14631028 Mepo3g05745 3 71585878 71595494 PCT