Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05741 ATGGTTTCAACGAGACGCAACAGTGGTGGATCTTTCCCCAACAACAACAACGCCGGTAAAAGACCTTCATCTTCTTCCGATGACAAACCTCCTTCTTCTCCTTCATCTAAACGCCAAAAGCCTGATAATGGCGCTGCTTCATCGGAGAAACCGCCGGAGAATTCAAATCAAGAACCGTCTGCCGATCCCGGAAAATGTGCTCAACCTGATGCTCAGATCGATGAACCTGTAGCAGCTGCTGATGATGATAAACCGGATGCAACTCCGCCGATTGCTGATGCTTCTACGCCGACTCTGGTAGCTGATAAACCAAGAGCTTCGTTTTCTTCTTGGAGTTTATATCAGAAGCAAAACCCGAACCTCGAGTCTTCAGCTCCGTGGTGCCGGCTTTTGTCACAGTCTGCTCAGCATCCGAATGTTTCGATTTGCATACCGAATTTCACTATTGGCTCGAGTAGAAATTGCAATTTTCATTTGAAGGATCATACGATAAGTGGAAATTTATGCAAGATCAAACATACACAGCGCGAGGGAAGTGACGTGGCTGTGCTAGAGAGTACGGGTAGCAAAGGATCTGTGATAGTTAATGGGACACTTGTCAAGAAGAGTACCTGCTGCACACTTAACTCAGGCGATGAGGTGGTTTTCGGCTTGCATGGAAATCATTCTTACATTTTCCAGCAAGTAAACACTGAGGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGCGTTGGTAAATTTATGCAGCTTGAAAGGAGAAGCGGAGATCCTTCAGCCGTGGCTGGGGCTTCTATCTTGGCATCTCTTTCTAATCTCAGACAGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCAGTAAACCTCACCAGGGCGCTGATGTTTCTATTCATACTGTTCTCCCTGATGGTACAGAAATTGAGCTTGATGGCCTGGGCAACTCAACTCCAAGCATGGGAACTGATAAAGCTGCCGATGCTGAGGCTAGCAACAAGAACACTCCCATGGATTGCGATCCAGAAGATGCGGGCGCAGAGCCAGGCAATGTAAAATACTCTGGGGTATTGGAAGAAAGAAATGGGGCGGAGGACACACAAGCTGCATCGACTTCTGGTACATCTGTACGCTGTGCAGTTTTTAAAGAAGACGCTCATGCTGCAATACTGGATGGAAAAGAACAAGAGGTGTCCTTTGACAACTTCCCATACTATTTAAGTGAGAATACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTACACCGCAGATCTTCCCACCGTTAACCCTCGTATTCTACTCTCAGGACCTGCAGGGTCAGAAATATATTCGGAGATGCTTGTAAAAGCACTTGCGAAATACTTTGGTGCTAAATTGCTCATATTTGATAGTCAATTGCTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAGCTGCTCAAAGATGGGTTTAATGCTGAGAAATCTTGCAGCTGCCCCAAACAAAGTCCTACAGCCACAGACATGGCTAAGAGCATGGATCCACCAGCTAGTGAAACAGACACACCTAGCTCTTCAAATGCTCCTACTCCACTTGGCCTTGAATCTCAAGCTAAGTTGGAAACTGATAGTGTACCATCTACGTCTGGGACAGCTAAAAATTGCTTGTTTAAACTAGGCGACCGGGTTAAATATAGTTCATCTTCTGCTTGTTTGTATCAGACATCTTCTTCAAGGGGTCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTAATTTTCGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCTGATGGGGTTGATCTTGGAGGTGCCTGTGAGGCAGGTCAAGGATTTTTCTGCAACATCACTGACCTTCGATTGGAAAACAGTGGCATTGACGAACTCGACAAATCGCTTATTAATACGTTGTTTGAGGTTGTAACTAGTGAGAGTAGAGATTCACCTTTCATTTTGTTCATGAAAGAAGCAGAAAAGTCTATAGTAGGAAATGGAGATCCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACTCCGACAGTCGAAAGGAGAAGTCACATGCTGGGGGTTTGCTTTTTACAAAGTTTGGCAGCAACCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTCGGAAGATTACATGACAGGGGTAAAGAAGTCCCAAAACCAAACAAAACTTTGACTAAGCTATTTCCAAATAAAGTAACAATTCACATGCCACAGGACGAGTCACTTCTAGCATCATGGAAACAACAACTTGATCGAGATGTGGAGACTCTTAAAATCAAAGGAAATTTGCACCATTTGCGCACCGTTTTAAGCCGCAGTGGGATGGAATCTGACGGACTCGAGAGCTTGTGTGTCAAGGACCTGACACTTACAAATGAAAATTCAGAGAAGATTCTTGGTTGGGCTTTAAGCCACCATTTGATGCAGAATCCCGAAGCTGACGCAGATGCAAAGCTTGTGTTGTCTAGTGAGAGCATCCAGTATGGAATTGGGATCTTTCAGGCTATCCAGAATGAGTCGAAGAGCCTAAAGAAGTCTCTTAAGGACGTTGTAACGGAAAACGAGTTTGAAAAGAGGCTTCTGGGTGATGTTATTCCACCTAATGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAATTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTCTGCAAGGGGCAGTTAACCAAGCCATGCAAGGGTATTCTATTATTTGGTCCCCCAGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACCGACGCCGGTGCAAACTTCATCAATATTTCAATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTGAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCCAGTGTGATATTTGTGGATGAAGTTGATAGCATGTTGGGCCGGAGGGAAAATCCAGGGGAGCACGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGTCTACGTACAAAGGATACTGAACGAGTTATTGTGCTTGCAGCCACCAATAGACCTTATGACCTTGATGAGGCTGTCATACGAAGGCTACCTCGGAGATTAATGGTAAATTTACCAGATGCTCCAAATAGAGCCAAGATATTAAAAGTTATACTCGCAAAAGAGGACTTATCTTCTGATGTTGATCTGGGTGCAATTGCAAATATGACCGACGGATATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACACCGTCCTATTAAAGAGATATTGGAAAAGGAAAAAAAGGAACTTGCTGCTGCTCTAGCAGAAGGTAGACCTGCACCAGCACTGCGTGGAAGTGATGATATCCGATCTTTAAACATGGAAGATTTTAAACATGCTCACCAACAGGTATGTGCAAGTGTTTCCTCTGAATCAGTAAATATGACGGAGCTTGTACAGTGGAATGAACTCTATGGTGAAGGTGGTTCAAGAGTTAAGAAAGCATTAAGCTATTTTATGTGA 3621 0.4386 MVSTRRNSGGSFPNNNNAGKRPSSSSDDKPPSSPSSKRQKPDNGAASSEKPPENSNQEPSADPGKCAQPDAQIDEPVAAADDDKPDATPPIADASTPTLVADKPRASFSSWSLYQKQNPNLESSAPWCRLLSQSAQHPNVSICIPNFTIGSSRNCNFHLKDHTISGNLCKIKHTQREGSDVAVLESTGSKGSVIVNGTLVKKSTCCTLNSGDEVVFGLHGNHSYIFQQVNTEVAVKGAEVQSGVGKFMQLERRSGDPSAVAGASILASLSNLRQDLTRWKSPSQTASKPHQGADVSIHTVLPDGTEIELDGLGNSTPSMGTDKAADAEASNKNTPMDCDPEDAGAEPGNVKYSGVLEERNGAEDTQAASTSGTSVRCAVFKEDAHAAILDGKEQEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTADLPTVNPRILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCPKQSPTATDMAKSMDPPASETDTPSSSNAPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVKYSSSSACLYQTSSSRGPSNGSRGKVVLIFDDNPLSKIGVRFDKPIPDGVDLGGACEAGQGFFCNITDLRLENSGIDELDKSLINTLFEVVTSESRDSPFILFMKEAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHTHSDSRKEKSHAGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDESLLASWKQQLDRDVETLKIKGNLHHLRTVLSRSGMESDGLESLCVKDLTLTNENSEKILGWALSHHLMQNPEADADAKLVLSSESIQYGIGIFQAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVIVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAIANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAALAEGRPAPALRGSDDIRSLNMEDFKHAHQQVCASVSSESVNMTELVQWNELYGEGGSRVKKALSYFM 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05741 1206 ProSitePatterns AAA-protein family signature. 1045 1064 IPR003960 GO:0005524|GO:0016887
Mepo3g05741 1206 MobiDBLite consensus disorder prediction 306 349 - -
Mepo3g05741 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1181 IPR027417 -
Mepo3g05741 1206 MobiDBLite consensus disorder prediction 495 533 - -
Mepo3g05741 1206 Pfam ATPase family associated with various cellular activities (AAA) 942 1071 IPR003959 GO:0005524|GO:0016887
Mepo3g05741 1206 CDD FHA 129 227 - -
Mepo3g05741 1206 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 380 1205 - -
Mepo3g05741 1206 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 900 1076 - -
Mepo3g05741 1206 CDD RecA-like_ATAD1 905 1071 - -
Mepo3g05741 1206 Pfam FHA domain 148 217 IPR000253 GO:0005515
Mepo3g05741 1206 Pfam AAA+ lid domain 1095 1130 IPR041569 -
Mepo3g05741 1206 Gene3D - 126 235 - -
Mepo3g05741 1206 Gene3D - 900 1181 IPR027417 -
Mepo3g05741 1206 MobiDBLite consensus disorder prediction 1 100 - -
Mepo3g05741 1206 SUPERFAMILY SMAD/FHA domain 111 227 IPR008984 GO:0005515
Mepo3g05741 1206 SMART AAA_5 938 1075 IPR003593 GO:0016887
Mepo3g05741 1206 Gene3D - 1074 1168 - -
Mepo3g05741 1206 MobiDBLite consensus disorder prediction 1 62 - -
Mepo3g05741 1206 MobiDBLite consensus disorder prediction 517 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05741 Mepo-Chr3 71550025 71563563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05741 901 1149 Calmodulin-binding Proteins AT3G56690 40.234 2.07e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05741 - - tpra:123897002 2112.42