Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05721 ATGGATAGGCTATGTTGTTTTAAGTCTTCATACTCTCAGCTTGTAGCATCGCGTCCTTCATCCAGCACTGGCAAGGGGAAGAATTATGAAGGTTCAATAAAATATGGTTTTAGCCTGGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGTTACAGGATAAAGAATTGGGTTTATTTGCTATCTATGATGGTCACCTAGGAGACCGTGTCCCCGCCTATTTACAGAAACATTTGTTTAGCAACATTTTAAGGGAGGAGGGATTTTGGGATGACCCTACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCTATTCTATCACATAGTTCTGATTTAGGGCATGGTGGATCAACAGCTGTAACTGCGATATTGATCGATGGAAGAAGACTATGGATAGCTAATGTTGGCGACTCGCGGGCTGTCATTTCAAGAAAAGGGCAAGCAGTACAAATGACTATCGATCATGAACCTAACACAGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCCAACTTGCCAGGTGATGTGCCAAGAGTAAATGGACAACTGGCTGTTTCACGCGCATTCGGAGATAGGAGTCTCAAGTCACATTTGCGATCGGACCCAGACGTACAAACAATTGATATAGATGTTGATATTGAAATTCTAATCCTTGCAAGTGATGGAATTTGGAAGGTAATGGCTAATCAGGAAGCAGTGGATATTGCTAAAAGAATGAAAGATCCACATAAAGCAGCAAAACAACTTGCAGCTGAAGCAATAAAAAGAAACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGGTGA 849 0.4111 MDRLCCFKSSYSQLVASRPSSSTGKGKNYEGSIKYGFSLVKGRANHPMEDYHVAKFVQLQDKELGLFAIYDGHLGDRVPAYLQKHLFSNILREEGFWDDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILIDGRRLWIANVGDSRAVISRKGQAVQMTIDHEPNTERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDRSLKSHLRSDPDVQTIDIDVDIEILILASDGIWKVMANQEAVDIAKRMKDPHKAAKQLAAEAIKRNSKDDISCVVVKFR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05721 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Mepo3g05721 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Mepo3g05721 282 SMART PP2C_4 30 279 IPR001932 -
Mepo3g05721 282 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Mepo3g05721 282 Gene3D - 30 282 IPR036457 -
Mepo3g05721 282 CDD PP2Cc 33 281 IPR001932 -
Mepo3g05721 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Mepo3g05721 282 FunFam Probable protein phosphatase 2C 39 25 282 - -
Mepo3g05721 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05721 Mepo-Chr3 71342747 71345052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05721 1 282 PP2C-type Phosphatase Gene Family AT1G22280 70.486 1.54e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05721 K17506 - gmx:100797292 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05721 3 71342747 71345052 Mepo3g05721 3 71342747 71345052 ECH