Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05720 ATGGGAAGGTCCCCTTGTTGTGATGAGAGTGGCCTAAAGAAAGGACCATGGACTCCTGAAGAAGATCAAAAGCTAGTTGAACACATTCAGCAACATGGCCATGGAAGTTGGAGAGCACTCCCTAAGCTAGCTGGTCTTAATAGATGTGGAAAGAGTTGTAGGCTAAGGTGGACCAATTATTTAAGGCCTGATATTAAGAGAGGAAAATTTTCTCAAGAAGAGGAGCAAACAATTCTTCATCTTCATTCAATCCTTGGAAACAAATGGTCAGCAATTGCTACACATCTACCTGGAAGAACAGATAATGAGATAAAGAATTTCTGGAACACTCATTTGAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCACCAACCAAGAACTGATCTTGTTTCCACCATACCATATCTACTAGCTTTAGCAAACATGACAGAACTTATGGATCATCATAATCAGTCATCATGGGATGATCAACAACATGCTGCAATGAGTAGTTTACAAGCAGAAGCACTTCATCTTGCAAAGCTTCAATGCCTTCAATATTTACTCCAATCTTCAAATTCTTCTATAGACAATAATAATAATTCCTATGACCAAAATGCCATGATCACAAACATGGAACAACAACAACCTTTAAGTTTATTAAACACAATCTCTAATGTGAAAGAGAACACAATAATGGACTGTTCACAACTGGATAGTACTCATGCAGCCTCATTTTCTCAACCACTCCACCACCTAAGTGTGCTACCCCACTTTCTAGACCCACAACAAGTCTCTTTCAGTTCACAATCATGTTTGAATAATGAACAAAGTCAAGGTGGTACTATTACCAACTTTGCAACAGTTGATGAAACATCATGGATTAATGTTCCATCTTCTGCTCCAATATCTGTTCCTCCAAGTGCTATAGGGATTTCAGCAGGAGATGCAAGCAGCTGCACTTCTAGCTATGGAGGAGGAGGAGGACCCTCTCCAGTGTCTTATTGGTCTGAACTTTTTTTTGAGGACCCCATTATGCATGATTTATCTTAA 1041 0.391 MGRSPCCDESGLKKGPWTPEEDQKLVEHIQQHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTIPYLLALANMTELMDHHNQSSWDDQQHAAMSSLQAEALHLAKLQCLQYLLQSSNSSIDNNNNSYDQNAMITNMEQQQPLSLLNTISNVKENTIMDCSQLDSTHAASFSQPLHHLSVLPHFLDPQQVSFSSQSCLNNEQSQGGTITNFATVDETSWINVPSSAPISVPPSAIGISAGDASSCTSSYGGGGGPSPVSYWSELFFEDPIMHDLS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05720 346 SMART sant 13 63 IPR001005 -
Mepo3g05720 346 SMART sant 66 114 IPR001005 -
Mepo3g05720 346 CDD SANT 69 112 IPR001005 -
Mepo3g05720 346 FunFam Transcription factor MYB39 69 130 - -
Mepo3g05720 346 CDD SANT 16 61 IPR001005 -
Mepo3g05720 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g05720 346 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo3g05720 346 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g05720 346 Gene3D - 11 67 - -
Mepo3g05720 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo3g05720 346 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo3g05720 346 FunFam MYB-related transcription factor 13 66 - -
Mepo3g05720 346 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g05720 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 238 - -
Mepo3g05720 346 Gene3D - 69 116 - -
Mepo3g05720 346 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05720 Mepo-Chr3 71326995 71328653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05720 1 346 MYB Transcription Factor Family AT1G34670 51.842 7.55e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g05720 Myb_DNA-binding 8.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05720 K09422 - gmx:100782792 455.677