Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05704 ATGACGAAACAAAATAATGCAGTAACACCAGAATTTAAGTCATGTATTAACAATCTTATCTCTACTGTGGTGTTGCCAAGTGCAGCTACCGTGCCAGAATCTATGGTTTTGATTAATGGGTTTTTGGATTTTTCTCATAATAATTTTACTAAGAGATTAGAAGAAAGTAAAGTTAATGCTTGGATTGATTCAATGAGAGCTGCTTCTCCAACTCGTGTCAAATCTTCAGAAAATCAAGAAAAAAGTTCTTGGATTCTTTATCATCCTTCAGCAATGAAATTGTTTGATCAAATATTGTATAGTGCAAAAGGAAAACAGATTGTGTTTTTTCTTGACTATGATGGAACTCTCTCACCTATTGTTGCGGATCCAGAAAAAGCTTTCATGACTAGAAAGATGAGAGCAACACTTAAAGATATAGCAAGAAATTTCCCAACAGCCATAGTGACAGGAAGATGCAGAGAGAAGGTGTTTAACTTTGTAAAATTGGCTGAGCTGTACTATGCAGCAAGCCATGGCATGGACATCATGGGACCAACAAAAAACCGAAGTGCTGAGAAAAGTAATACTAACAAAGCTGTGTTGTTCCAACCTGCAAGTCAATATCTACCAATGATAGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAGTCTGTCTCAGGAGCTAAGGTAGAGAACAACAAATTTTGCTTGTCCGTGCACTTTCGTTGTGTTGATGAAAAGAGTTGGGCTCCTTTGGCTGAGAAAGTTAGATTGGTGCTAAATGAATACCCAAAACTTAAGCTAACACAAGGAAGAAAAGTGCTTGAGATTCGTCCCACTATCAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGTTGGAATCATTAGGATACAAGAACTCAAATGATGTATTCCCAATCTATATTGGGGATGATCGAACCGATGAGGATGCTTTCAAGGTTTTGCGTAGAAGGGGTCAAGGAGTTGGTATTCTTGTTTCTAGTGTGCCAAAAGAAACAGATGCTTCCTACACATTACAAGACCCGTCAGAGGTTGAGCATTTTTTGCGGCGATTGGTGGAGTGGAAAAGATCAAGTAATGTGAACCCCACAAGTGCATAG 1107 0.3821 MTKQNNAVTPEFKSCINNLISTVVLPSAATVPESMVLINGFLDFSHNNFTKRLEESKVNAWIDSMRAASPTRVKSSENQEKSSWILYHPSAMKLFDQILYSAKGKQIVFFLDYDGTLSPIVADPEKAFMTRKMRATLKDIARNFPTAIVTGRCREKVFNFVKLAELYYAASHGMDIMGPTKNRSAEKSNTNKAVLFQPASQYLPMIDEVYKILLEKTKSVSGAKVENNKFCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYKNSNDVFPIYIGDDRTDEDAFKVLRRRGQGVGILVSSVPKETDASYTLQDPSEVEHFLRRLVEWKRSSNVNPTSA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05704 368 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 48 362 IPR044651 GO:0004805|GO:0005992
Mepo3g05704 368 SUPERFAMILY HAD-like 108 357 IPR036412 -
Mepo3g05704 368 NCBIfam HAD-IIB family hydrolase 109 320 IPR006379 -
Mepo3g05704 368 FunFam Trehalose 6-phosphate phosphatase 205 364 - -
Mepo3g05704 368 CDD HAD_TPP 108 347 - -
Mepo3g05704 368 Pfam Trehalose-phosphatase 110 345 IPR003337 GO:0003824|GO:0005992
Mepo3g05704 368 NCBIfam trehalose-phosphatase 105 355 IPR003337 GO:0003824|GO:0005992
Mepo3g05704 368 Gene3D - 107 207 IPR023214 -
Mepo3g05704 368 Gene3D - 213 366 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05704 Mepo-Chr3 71104522 71106874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05704 103 354 Trehalose Biosynthesis Gene Families AT1G70290 27.612 6.16e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05704 K01087 - gmx:100788641 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05704 3 71104522 71106874 Mepo3g05704 3 71104522 71106874 ECH
Mepo7g01513 7 23897992 23900653 Mepo3g05704 3 71104522 71106874 PCT