Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05702 ATGGCAGCTATGATGGATTATTACAGTAACATGCAACAGTTTCATAACTCAGATCCATTTAGAGGTGAATTAATGGAAGTTCTTGAACCTTTTATCAAAAGTCCTTCATCTTCAACACCATCACCTTCTTATTCTTCTTCTCTCTCTTCTCTCTCTCCTTTCTACACAGAGCAAAACTTCATTGGCTTTGCTCAACCTTCTTCTTCTTCTTCTCTTCTTGGTCTGAACCATTTGACCCCATCACAAATCAACCAAATCCAAGTACAAATCCAACAACAAAACTTCACCATGCAACAACAACAACTTCAACAACAACGTTGTCTCAGTAACACTTTGAGTTTTCTTAGTCCAAAGTCAATTCCTATGAAGCATGTGGGTGGTAGTGTTTCAAAACCCACGAAGCTATACAGAGGAGTGAGACAAAGGCACTGGGGAAAATGGGTTGCTGAGATAAGACTACCTAAGAACCGTACGAGGTTATGGCTTGGTACCTTCGACACAGCTGAAGAAGCTGCTTTGGCTTATGATAAAGCTGCTTATAAGCTACGTGGTGACTTTGCTAGGCTAAATTTTCCAAATTTGAAACACCGAGGTTCAATTATTGGTGGTGAGTTTGGTGAATTTAAGCCTCTTCCTTCTTCTGTTGATGCTAAGCTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGGAAGGCAGAGAAGCCGAAGAAGACGCCGGCAGCGAAGGCGAAAGCCGCTTCTAAGGTGGTTTCTAAGGAGTCTGTTGATGATTTGAAGAAGGATTCAGAGCCAGAGGAGTGTTGTAAGGTTGAAGCAGTTTCAGTGATTACTGAGAGTGAAGGTTCTGAAGGTTCTTCACCACTCTCAGATCTTACTTTTGGTGATTTTGGTGAGCCACAGTGGGAGGGTGATTCAGAAAATTTTAATTTGCTGAAATACCCTTCTTATGAGATTGATTGGGATTCTCTGTGA 981 0.4149 MAAMMDYYSNMQQFHNSDPFRGELMEVLEPFIKSPSSSTPSPSYSSSLSSLSPFYTEQNFIGFAQPSSSSSLLGLNHLTPSQINQIQVQIQQQNFTMQQQQLQQQRCLSNTLSFLSPKSIPMKHVGGSVSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHRGSIIGGEFGEFKPLPSSVDAKLQAICEGLAEMQKQGKAEKPKKTPAAKAKAASKVVSKESVDDLKKDSEPEECCKVEAVSVITESEGSEGSSPLSDLTFGDFGEPQWEGDSENFNLLKYPSYEIDWDSL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05702 326 FunFam Ethylene-responsive transcription factor 2 134 193 - -
Mepo3g05702 326 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 MobiDBLite consensus disorder prediction 280 300 - -
Mepo3g05702 326 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 Gene3D AP2/ERF domain 135 193 IPR036955 GO:0003700|GO:0006355
Mepo3g05702 326 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 326 - -
Mepo3g05702 326 CDD AP2 134 194 IPR001471 GO:0003700|GO:0006355
Mepo3g05702 326 SUPERFAMILY DNA-binding domain 135 192 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05702 Mepo-Chr3 71086610 71088420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05702 1 326 AP2-EREBP Transcription Factor Family AT1G78080 51.685 5.62e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo3g05702 AP2 7.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05702 K09286 - gmx:100800478 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05702 3 71086610 71088420 Mepo3g05702 3 71086610 71088420 ECH
Mepo7g01508 7 23815594 23817612 Mepo3g05702 3 71086610 71088420 PCT