Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05687 ATGATGTCGTCGTGTAATTCTTCTCCGTGTGCAGCGTGCAAGATTCAGCGTCGAAAATGCACAAAGGAATGCATTTTTGCACCGTATTTTCCGCCGGAAAATCCTCAAAAGTTTACCTACGTTCACAAAGTTTTCGGTGCTAGCAACGTGGCAAAGTTACTCAACGAGGTTGATGCTTCTCAACGTGAAGATGCTGTTAAGTCTTTAGCTTATGAAGCAGAAGCGCGTTTGAGAGATCCTGTTTATGGTTGTGTTGGTGTTATTTCTCATCTTCAGAATAAGCTTAAGAATTTGCAGAATGAACTTAATGTTGCTAAGAAAGAACTTGCTACTTATGTTGGTCCTCAGATCATGCTTCCTACACCGATGACGGCGGTGTCGAGTTCTTATTTTTCTGTTACTTCTTCTGTTCATCAACAGCGTCAAGAGTTTTTCACTTTCAATGCTGAAAACTCGTTTTCTAACAACTTTCAGATGAACCCTTTTCAGAATCAGTTAATGGTTTCATCATCATCATCATCACAGGCACAATCTTCACAACCCATCAACCCATTTTTGTCAAAGAAGGTGTTCAAGGCAGAAAGGGACAACCTTAGAGAGGCTTAA 606 0.4059 MMSSCNSSPCAACKIQRRKCTKECIFAPYFPPENPQKFTYVHKVFGASNVAKLLNEVDASQREDAVKSLAYEAEARLRDPVYGCVGVISHLQNKLKNLQNELNVAKKELATYVGPQIMLPTPMTAVSSSYFSVTSSVHQQRQEFFTFNAENSFSNNFQMNPFQNQLMVSSSSSSQAQSSQPINPFLSKKVFKAERDNLREA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05687 201 Coils Coil 88 108 - -
Mepo3g05687 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 176 - -
Mepo3g05687 201 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Mepo3g05687 201 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05687 Mepo-Chr3 70874649 70876533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05687 7 120 AS2 family AT5G66870 77.193 6.43e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g05687 LOB 3.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05687 - - mtr:25489402 365.54