Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05678 ATGGATATATACGAGCCATTCCAGCAAGTTAGCATGTGGGGTGACAGTTTTAAAGTTGAAGGTGGTCTTAATTCAATTGCTTCCCCAATGTTACTAGTGAACAGTAACACTACTAGCATGGAGAACAAGTCTGAATATATTCCTCATGAACCAAGGGATCATTCAGAAGCTGAACAAGAGATTACAAATAATAAGGTACTTAGACGCCTCGCCCAGAATCGAGAGGCTGCTAAGAAAAGCCGGGAGCGCAAAAAGGCTTATGTTAAACAATTAGAATCAAGCAGATTGAAGCTCATGCAATTGGAGCTGGAGATTGGGAGAGCAAGAAAGCAGTTGCAGGGTATTTGCACAGGAAATGCATTAGACACCAGTTTTATGGGATCATCTGAAACAATAAACCCAGGGATTGTCGCGTTTGAAATTGAATATGGAAATTGGGTTGACGAGAACAATAGGCGGAACGAAGAACTCAGAAATGCATTTCAAACTAATGCGTCTGAAGTGCAGCTCCGTCTAGTTGTTCAGAGTGTCTTGAGTCATTACTCGGATCTTTTCAGAATGAAAACAGATGCTGCAAAGGCTGATCCCCTCTATTTAATCTCCGGTGTGTGGAAACCATCCGTAGAGCGCCTTTTCCTATGGATCGGAGGATCTCGCCCATCACAGCTTCTAAATCTCATTGTGCCACAACTTGAGCCTTTGTCTGATGAACAAATGTTGAGCATTAAAAAACTTCACCTGTCGTCTCAGCAAGCCGAAGATGCTCTTTCACAAGGACTAAATAAACTCCAGGAGAGCCTGGTCCAAGACATGGCATTTGTTCCATTAAATGCTGCAAATCATGGAATTCAGATGGCTATTGCTATAGACAAATTTGAGGGACTAGAAGGTTTTGTAATCCAGGCAGATCATCTCAGACAGCAAACTCTGATACACATGTTCCGCGTCCTGTCTACACACCAAGCTGCTAGGGGATTGATTGCTGTTGGGGAATACTTTCATCGTCTTCGTACTATATGTTCTCTTTGGACTTCTCGTCCATTCGATTCCATGATATCACCTAGGATTACTCCTTAG 1077 0.4271 MDIYEPFQQVSMWGDSFKVEGGLNSIASPMLLVNSNTTSMENKSEYIPHEPRDHSEAEQEITNNKVLRRLAQNREAAKKSRERKKAYVKQLESSRLKLMQLELEIGRARKQLQGICTGNALDTSFMGSSETINPGIVAFEIEYGNWVDENNRRNEELRNAFQTNASEVQLRLVVQSVLSHYSDLFRMKTDAAKADPLYLISGVWKPSVERLFLWIGGSRPSQLLNLIVPQLEPLSDEQMLSIKKLHLSSQQAEDALSQGLNKLQESLVQDMAFVPLNAANHGIQMAIAIDKFEGLEGFVIQADHLRQQTLIHMFRVLSTHQAARGLIAVGEYFHRLRTICSLWTSRPFDSMISPRITP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05678 358 SUPERFAMILY Leucine zipper domain 66 98 IPR046347 GO:0003700|GO:0006355
Mepo3g05678 358 SMART brlzneu 58 121 IPR004827 GO:0003700|GO:0006355
Mepo3g05678 358 FunFam BZIP family transcription factor 64 115 - -
Mepo3g05678 358 Coils Coil 84 111 - -
Mepo3g05678 358 Pfam bZIP transcription factor 65 94 IPR004827 GO:0003700|GO:0006355
Mepo3g05678 358 ProSiteProfiles DOG1 domain profile. 136 346 IPR025422 GO:0006351|GO:0043565
Mepo3g05678 358 Gene3D - 64 117 - -
Mepo3g05678 358 Pfam Seed dormancy control 155 228 IPR025422 GO:0006351|GO:0043565
Mepo3g05678 358 PANTHER TRANSCRIPTION FACTOR TGA9 1 348 - -
Mepo3g05678 358 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05678 Mepo-Chr3 70786035 70788995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05678 1 347 Calmodulin-binding Proteins AT1G22070 50.820 2.83e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g05678 DOG1 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05678 K14431 - gmx:100794268 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05678 3 70786035 70788995 Mepo3g05678 3 70786035 70788995 ECH
Mepo7g01471 7 23204968 23207650 Mepo3g05678 3 70786035 70788995 PCT