Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05671 ATGAACCGCCAAGTACTACCACCGTCACCAAAAAACGCAACCACACTCAACCCCAAAATCTGGCGAGCTATCGCCGGCGCCGCCGTGCAAATCCCCACCGTCAATTCTAGGGTTTACTACTTCCCTCAAGGTCACATGGACCAAGCTACTTCACTTCCGAACAATCTCTCACCTCTTCTTCTCTCTCGTCCCTACATTCTCTGCTCTGTCTCCGCCGTTCATTTCCTCGCCGATCCGAAAACCGATGAGGTTTTCGCTAAGCTTTTTCTGCAACCGTTGAATGATTTCACTGTTAACTTTCCTCGGATTCCGGTGATTGAAGCTGATGACGGTGAGATGATTTCTTCGTTTGCCAAGATTCTTACTCCTTCTGATGCGAACAACGGTGGTGGATTTTCTGTTCCGAGGTTTTGTGCTGATTCGATTTTTCCTCCGTTGGATTATAGTATGGATCCTCCGTTGCAGAATCTGTTGATTACTGATGTTCATGGTTTGACTTGGGAGTTTCGTCACATTTACCGTGGAACGCCGCGCCGGCATTTGTTGACCACCGGTTGGAGTAGGTTTGTGAACGCTAAGAAGCTTGTTGCTGGTGATTCCGTTGTTTTTATGAAGAATACTAGAGGTGCAATGTTCATCGGAATCCGTCGTGCTGTTCGATTCGTTCCGAATCGAACTGGTTCCAGTGGTTGCTCCGATGTGTCGAGATTGTGTCTTCCGATCTGTGGAGTGAGAAGTAGGGTGGATGATGAAGAGAAGCTGGTGGAAGAGAAGGCATTTTCGAGGCACGGGAAGGGGAAGTTGTCGCCGATGGCGGTTGCGGAGGCTGCGGAAATGGCGGCTCAGGGGATGGGTTTTGAAGTTGTTTACTATCCGAGAGCAGGGTGGTCGGATTTTGTGTTGAAAGCGGAGGTTGTGGATGCGGCCATGAGTGTTACTTGGTGTCCTGGAATGAGAATCAAAATGGCTGTGGAGACTGATGATTCTTCCAGGACTACTTGGTTTCAGGGTGTAGTGTCTCAGGTTTCTGTTCCTGATCATGGTGCTTGGCGTGGTTCGCCTTGGCGTATGCTTCATATTACATGGGACGAACCTGAAGTGTTGCAAACTTCCAAGTGGGTCAGCCCTTGGCAGGTGGAACTTCTTTCTACTACACCTTCCCTTCATACCCCCTTTCCCCCAATGAAAAGGACTAGAGGGGTGTCTGGGGTGTTAACTGATGGAGATGGAGACCCCTTTTCTATCACAGGGTTCACTAATTCAACAATGGGACAATTGAATCAACCATTGTTGAGTTACAGTACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATCTATTTTCCGTTTCAAGTTTTTCCAACTTTCCAGGTGATAACTTCCGTCTTTGTATGGGTAACTCCTTTGGCAGCAACACAGTGCCGGGGTTGAAATCTTTTTCAACGGATCTAAACGTTGGCAGTTCTCAGTCTGGTGATTTTTCACCAGAGAGCCAGAGTAGTTTGCCTTCCTTTGGCACAGATTTTGTTCGGAACTACAACTGCAACTCAATGAAACCCGGGCCTATAACGTTTCAGCTATTTGGTGCAGTCATTCAGACAGAACAGCCTGTTGAAAGTGGTTCACATGGTACTGTTAGCACAGGAGATGACAGCAGTAAGGGCTGCAATGAAACTGAAGGCATTAACAACCCTCTTGAGGATTCGACTTACTCAAAATTGCTTGACAGGCTTGATGGCCAGTGCCAAATAGCCTCAACAGTTGAGGCGTGCTATCTGTGA 1782 0.4798 MNRQVLPPSPKNATTLNPKIWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGEMISSFAKILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSRFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTGSSGCSDVSRLCLPICGVRSRVDDEEKLVEEKAFSRHGKGKLSPMAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPMKRTRGVSGVLTDGDGDPFSITGFTNSTMGQLNQPLLSYSTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNSFGSNTVPGLKSFSTDLNVGSSQSGDFSPESQSSLPSFGTDFVRNYNCNSMKPGPITFQLFGAVIQTEQPVESGSHGTVSTGDDSSKGCNETEGINNPLEDSTYSKLLDRLDGQCQIASTVEACYL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05671 593 MobiDBLite consensus disorder prediction 538 563 - -
Mepo3g05671 593 Pfam Auxin response factor 276 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo3g05671 593 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 554 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo3g05671 593 FunFam Auxin response factor 115 219 - -
Mepo3g05671 593 Gene3D - 314 387 - -
Mepo3g05671 593 Gene3D - 114 219 IPR015300 -
Mepo3g05671 593 SMART B3_2 117 219 IPR003340 GO:0003677
Mepo3g05671 593 Pfam B3 DNA binding domain 117 218 IPR003340 GO:0003677
Mepo3g05671 593 CDD B3_DNA 116 217 IPR003340 GO:0003677
Mepo3g05671 593 SUPERFAMILY DNA-binding pseudobarrel domain 113 223 IPR015300 -
Mepo3g05671 593 ProSiteProfiles B3 DNA-binding domain profile. 117 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05671 Mepo-Chr3 70723652 70728455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05671 12 560 B3 DNA Binding Superfamily AT1G77850 48.658 2.89e-166 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo3g05671 B3 1.5e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05671 - - qsu:112025063 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05671 3 70723652 70728455 Mepo3g05671 3 70723652 70728455 ECH