Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05666 ATGCTTTCGTTCATCTGCATCTTCTTATTGCCGGCGCCGATGACCGGAACCGGAGAACGATGCCACCGCCGCAACAACATGACGGAGCAAGAATCATCTGCCTGTCCGGCCGCCGCTCCGGCGGGAATCTCCGCCGCTGATTTGGAGATTGATTACTTCTCGCAGGCGAGGAAAGTGCTGAGCGAGCGTTCACCGTTTGATGTTATCGAGGAACCGTCGACTTCTGCGGCGGTGGAGGTTACACTGCCGAGTGGTTTAGCCAGTTTGTTGAACCGTAACGGGGATAATAAGAAGCGTCAGAAGAAGTTGAATTCCGGTGGTGGTGGTGGTGATAAGAAGAAGAAGAAATCGTCGAGGGCCAATGAGAAACGTGGTTTTAATGTTTGGGTTGAGACGGAGGAGTATTTTAGGGACTTGAATTTGAATGATATCGATACGTTATTGCAGGCTTATACTACGACTTATAGTTTAGTTTCGAACGAGTGTTTTAAAATTCCGCATTTGGATAATGGTTCTAGGTTTAGTTTAGTTGGTAGTGAGAATGAGAAGAAGATTGTTCCATTGTTGAATGTAGTTTCTAATGAGAATGAGAATTCGGATGAGAAGAATGATGTCGAAGAAGTTAATAATGAGAATGAGAATGAGAATGGTTCCTTGGCAATTGAGTTAAGTGACGTTGTTGAATTGGAAAGAGCTTTGCCGAATAACGATGACAAGAATTGTGATGATTCTGAGAATTGTGTTGGTTTAGAGTGGTTTTTAGGTAGCAGGGATAAGGTTTTTTTAGCTTCTGAGCGCCCATCGAAGAAAAGGAAACTTTTAGGTGGTGATGCCGGTTTGGAGAAAGTTGAAATGAATAGTCCAAGTGACGGGGACCAACCTTATTGTCATTATTGTGGCAGGGGAGATTCGGACGCTGATTCAAACCGGTTAGTAGTATGCGCTTCTTGTAAAGTTGCGGTTCATAGGAAGTGTTATGGTGTGCAAGATGATGTAGATGATTCATGGTTGTGCTCTTGGTGTTCAAAGCAAAAGTGTGATGTTGATGACTCGGTGAATCCTTGTGTTCTTTGCTCAAAGAAGGGTGGCGCTTTAAAACCGGTTTACAGTGCTGTTGAAGGTGTTGGGTCTTCGCCGTTTGTGCACCTTTATTGTTGTCTGTGGATGCCAGAGGTTTATATTGAAGATTTGAAGAAGATGGAGCCTGTTATGAATGTGGGAGGCATTAAGGAAAACAGAAGAAAATTGATGTGTAATATTTGCAAATTGAGATGTGGTGCATGTGTTCAGTGTACTCATGGATCCTGCAGAACTCCTTTCCATCCTTTATGTGCAAGGGAAGCTAGACATAGAATGGAGGTTTGGGCGAAGTACGGCAATGATAATATTGAATTGCGGGCTTTTTGCTCGAAACACTCAGATCTACAAGAGAACAGAAGCATCTTGCCTTTGGGAGGCTCTATTCCAGTTGGCAGTGAATTTCTCGAAGCTAATGGCCTTCCAGTGACATCACCAGTGAAAAGTGAACACAATATAAAAATTGGTTGCAGCAATGGAGCGTTGGAGTCTGATAGTAATTCTGACAAGTTGAACCATAATGATGAACCTCCGAATGGAGGATTGTCTGTCGGTACGATTAGCGCACAAAATATGTTGGTATGTGGCGCTGCGCAACCACATAATATTGGTGCGGCAGGGAGAACCAATGAGAAGCTTGATGCCTCTAATTCCCCCAGTTTTGCACTTGTTTTGAGAAAGTTGATAGAGAAAGGGAAAGTTGATGTAAAAGATGTTGCATTGGAGATTGGCATTTCCCCAGATACATTAACTGCAAATATCAATGAAGCTCATATGGCCCATGATGTGCAACACAAAATAGTCAATTGGTTAAAAGTCCATGTGTATACGGGTGCATTTCATAAAGGCTCAAAAGCCAAATTCAAATCGGTATCTGTGGATGAAAGTGGAGCTTCAGCTGGTTCTGATACTTCACCGTTATCTGATTCAGGCTTGCTTGATCCTGTTGCTGTTAATGTTAAGTCTGTACCACCAAGGAGAAGAACTATCAATAACATTAGGATTTTGAAGGACAATAAAGTGATATGTTCATCTGAGGGGGTTACTACTAATGACGGTGGGGTGTCAATTGATAAGTCCTTGGTTTGTCAGCCTGAGTGTGAAAATCCAGGAAGTTCTAACAAAGCATCAGTTCCCGATGCCACGGACATGAATTTAACCAAGTCTGAGGATATATTTCATGAGGTTCAAGGGAATGCTGATGACCCCTACAAATCCAGCTTATCTGTATGCGCTTCAGAACAGAACTCTACTGCTTGTTTGCAGAATGCATCTATGCTTTCCGATCAGCACATTCCAGCTCACTCTGCTTCAGAACCACCCCTTCCTGGTTTCAGAAAACTGGAAGCAGTCTCTAGTTACGCTCACCCATACATTAACAAGAAACTGCTGCAGATTCGGAATGGCTTGCCCTCGCAGAACCTTATGGGTTTAAGTGGGTCCAGAAATTCTTTCGTTGAATCATTTGGAGCTAATAACTGCCCGAGTAGTGAAAATCAGCAGTTAATTTGTACTGACGTTTCCAAGCCTGATCCAGTAAAGATGGAGCAGTTGGTTAGGGATGAACAAATGCAACTTACGGAATTTTATTCAGAAGATGAGTTGGAGTGTGATCTTATATATTTTCAGCATAAACTGCTACAGGAGGCAGTTGCAAAAAAGAGGCTTGCTGAAAACTTGGTCTACAATGTTGCCAAGAGTTTGCCCCAGGAGATTGATAAAACACATCAACAAAGATGGGATGCGGTGATTGCTAGTCAATATCTGCGTGATCTTAGAGAGGCAAAGAAACAGGGTAGAAAAGAAAAAAAACACAAGGAAGCACAGGCAGTATTAGCTGCTGCAACTGCTGCAGCAGCATCATCGACTAGGGTTTCTTCTTTCCGTAAAGATACCATAGACGAATCTATGCAACAGGAGAATTCATTGAAGTTGGATGCTTTAAGTGGGCGGACTGGTCCATGTTCTCTGCCAATGCCCCGTGCCAAAGAGACTCTTTCTAGAGTTGCTGTCACTAGAGCTTCGTCAGAGAAATATTCGGATTTTTCTTTGCCAAGATCAGATATTTCTAAGGAGCAACGTAAATCATGTGATATCTGCAGACGATTTGAGAATGTGTTAAATCCTATCCTAGTCTGCTCTGGTTGCAAGGTTGCGGTGCATTCAGTTTGCTATCGTAGTGTGAAAGAAACAACCGGTCCATGGTACTGTGAATTATGTGAAGATCTATTGTCAAGAAGTGGGCCATCTGCCATAAATAGCTGGGAGAAGCCATATTTTGTTGCAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGGAAGTCGTCTGATGGTCAATGGGTTCATGCCTTCTGTGCTGAGTGGTTTTTTGAGTCTACGTTCAGAAGAGGACAGATAGATGCTATTGAAGGAATGGAGACTGTGCCAAAAGGAGTTGATATTTGTTGCATCTGCCACCGAAAGCATGGTGTATGTATGAAGTGTTGCTATGGCCATTGCTTGACCACATTCCATCCATCCTGTGCTAGAAGTGCCGGTTTGTTCATCATTATGAGGACTGCTGGGGGCAAGATGCAACACAAAGCTTACTGTGAAAAGCATAGTTCAGAGCAGAGAGCAAAGGTTTTACTTTTTGTCTCTTGGTGTAAAATGTCCTCTTTGTTGGCAATCCATAATGACATCTTAAGTTTCAATTCCTCATTTTCCCAGGCTGAAACTCAAAAGCATGGAGTTGAGGAGTTAAAAAGTATCAAGCCAATTAGGGTTGAACTTGAGAGATTACGTCTCCTTTGTGAAAGGATTGTCAAACGGGAAAAGATTAAGAGGGAATTGGTTCTATGCTCGCACGACATACTTGCCTTTAAAAGAGATCATGTTGCTAGGTCTGTGCTTGTTCGCAGTCCTTTCGTCCTTCCAGACGGTAGTTCAGAATCAGCTACAACATCCCTGAAAGCAACCACAGAGGGATACAGGTCGTGCAGTGAAGCGCGCCAAAGATCAGATGATGTAACTGTGGATAGCTCAGTTTCTGCTAAGCACCGTGTCAGAGTTTCTGTATCCATGGACACAGACCCAAAATTGGATGATGACTGCTCAACCTCACAAAGTCACTATAACCACAAGATTCCAGAGAAGATGCAACTTTCTGGCAAACAGATTCCCCGTAGAGCTTCTGCTACATCACGCAATATCTCTGAGGAGGATGCATGGAGATCCAAATCTCGAAAGTTACAGACCAATGAATCATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCAAGGCTACCTAAAGGATATGCATATGTTCCTGCGGATTGCCTGTCAAATGACAAGCAGTCTAACGAGGATGTATATGCTGGTGGACCAGGGGAACGTGATGGGTAG 4485 0.4317 MLSFICIFLLPAPMTGTGERCHRRNNMTEQESSACPAAAPAGISAADLEIDYFSQARKVLSERSPFDVIEEPSTSAAVEVTLPSGLASLLNRNGDNKKRQKKLNSGGGGGDKKKKKSSRANEKRGFNVWVETEEYFRDLNLNDIDTLLQAYTTTYSLVSNECFKIPHLDNGSRFSLVGSENEKKIVPLLNVVSNENENSDEKNDVEEVNNENENENGSLAIELSDVVELERALPNNDDKNCDDSENCVGLEWFLGSRDKVFLASERPSKKRKLLGGDAGLEKVEMNSPSDGDQPYCHYCGRGDSDADSNRLVVCASCKVAVHRKCYGVQDDVDDSWLCSWCSKQKCDVDDSVNPCVLCSKKGGALKPVYSAVEGVGSSPFVHLYCCLWMPEVYIEDLKKMEPVMNVGGIKENRRKLMCNICKLRCGACVQCTHGSCRTPFHPLCAREARHRMEVWAKYGNDNIELRAFCSKHSDLQENRSILPLGGSIPVGSEFLEANGLPVTSPVKSEHNIKIGCSNGALESDSNSDKLNHNDEPPNGGLSVGTISAQNMLVCGAAQPHNIGAAGRTNEKLDASNSPSFALVLRKLIEKGKVDVKDVALEIGISPDTLTANINEAHMAHDVQHKIVNWLKVHVYTGAFHKGSKAKFKSVSVDESGASAGSDTSPLSDSGLLDPVAVNVKSVPPRRRTINNIRILKDNKVICSSEGVTTNDGGVSIDKSLVCQPECENPGSSNKASVPDATDMNLTKSEDIFHEVQGNADDPYKSSLSVCASEQNSTACLQNASMLSDQHIPAHSASEPPLPGFRKLEAVSSYAHPYINKKLLQIRNGLPSQNLMGLSGSRNSFVESFGANNCPSSENQQLICTDVSKPDPVKMEQLVRDEQMQLTEFYSEDELECDLIYFQHKLLQEAVAKKRLAENLVYNVAKSLPQEIDKTHQQRWDAVIASQYLRDLREAKKQGRKEKKHKEAQAVLAAATAAAASSTRVSSFRKDTIDESMQQENSLKLDALSGRTGPCSLPMPRAKETLSRVAVTRASSEKYSDFSLPRSDISKEQRKSCDICRRFENVLNPILVCSGCKVAVHSVCYRSVKETTGPWYCELCEDLLSRSGPSAINSWEKPYFVAECALCGGTTGAFRKSSDGQWVHAFCAEWFFESTFRRGQIDAIEGMETVPKGVDICCICHRKHGVCMKCCYGHCLTTFHPSCARSAGLFIIMRTAGGKMQHKAYCEKHSSEQRAKVLLFVSWCKMSSLLAIHNDILSFNSSFSQAETQKHGVEELKSIKPIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVRSPFVLPDGSSESATTSLKATTEGYRSCSEARQRSDDVTVDSSVSAKHRVRVSVSMDTDPKLDDDCSTSQSHYNHKIPEKMQLSGKQIPRRASATSRNISEEDAWRSKSRKLQTNESFGKELVMTSDEASMKNSRLPKGYAYVPADCLSNDKQSNEDVYAGGPGERDG 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05666 1494 ProSiteProfiles Extended PHD (ePHD) domain profile. 352 473 IPR034732 -
Mepo3g05666 1494 ProSiteProfiles Zinc finger PHD-type profile. 1053 1102 IPR019787 -
Mepo3g05666 1494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 348 IPR013083 -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1334 1354 - -
Mepo3g05666 1494 ProSitePatterns Zinc finger PHD-type signature. 296 341 IPR019786 -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 523 542 - -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 89 122 - -
Mepo3g05666 1494 Coils Coil 191 218 - -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1427 1441 - -
Mepo3g05666 1494 SUPERFAMILY FYVE/PHD zinc finger 1046 1100 IPR011011 -
Mepo3g05666 1494 Coils Coil 948 968 - -
Mepo3g05666 1494 ProSitePatterns Zinc finger PHD-type signature. 1056 1099 IPR019786 -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1380 1396 - -
Mepo3g05666 1494 Pfam PHD-finger 1067 1100 - -
Mepo3g05666 1494 Pfam PHD-finger 309 341 - -
Mepo3g05666 1494 SUPERFAMILY FYVE/PHD zinc finger 284 348 IPR011011 -
Mepo3g05666 1494 SMART PHD_3 1175 1229 IPR001965 -
Mepo3g05666 1494 SMART PHD_3 295 342 IPR001965 -
Mepo3g05666 1494 SMART PHD_3 417 473 IPR001965 -
Mepo3g05666 1494 SMART PHD_3 1055 1100 IPR001965 -
Mepo3g05666 1494 Pfam PHD-zinc-finger like domain 1122 1228 - -
Mepo3g05666 1494 Pfam PHD-zinc-finger like domain 354 472 - -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 94 116 - -
Mepo3g05666 1494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1120 1231 IPR013083 -
Mepo3g05666 1494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 475 IPR013083 -
Mepo3g05666 1494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1031 1106 IPR013083 -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1472 1494 - -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1380 1442 - -
Mepo3g05666 1494 ProSiteProfiles Extended PHD (ePHD) domain profile. 1120 1229 IPR034732 -
Mepo3g05666 1494 PANTHER PHD FINGER PROTEINS 93 991 - -
Mepo3g05666 1494 MobiDBLite consensus disorder prediction 1334 1368 - -
Mepo3g05666 1494 CDD ePHD 1123 1228 - -
Mepo3g05666 1494 ProSiteProfiles Zinc finger PHD-type profile. 293 344 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05666 Mepo-Chr3 70659712 70671198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05666 290 479 C2H2 Transcription Factor Family AT3G14740 30.052 3.70e-17 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05666 3 70659712 70671198 Mepo3g05666 3 70659712 70671198 ECH